PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390590.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 329aa    MW: 35970.9 Da    PI: 9.2053
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390590.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.89.1e-12555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+  l+ +v ++G g W+tI +  +       R+  ++k++w++
   XP_026390590.1  5 KQKWTSEEEAALKAGVIKHGAGKWRTILKDPQfsgilSLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGAPKQKWTS EEEAALKAGV IKHGAGKWRT ILKDPQFSGI LSLRSNVDLK DKWRNMSVTA  60
NGWGSREKAR VALKRSHQMY RNGDDEDHDD GEDDLAPSTV IQSDEEVYDV KPLAMTSQNL  120
QINGPKKSLS RLENLILEAI SSLNEPTGSN KTTIGIFIED QYDAPPNFKK ILSAKLKSMT  180
ANKKLIKVKR KYRIAPRPRF PSDGGNPGML GLEGVGQRDI KPDITVRPTK IQVDADLAKM  240
RNMTAEEAAA AAARAVAEAE AAIAEAEEAA READAADVDA EEAQAFAEAA LMTLRNRNAS  300
KMVILHVDGS GRRKPVKDAS LQLLSMKAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.13e-78MYB_related family protein