PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390820.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 139aa    MW: 15690.8 Da    PI: 6.6643
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390820.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR149.61.3e-1547129289
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                      Y++YA  +GF  ++++skk   +g   + t++C k+gk++  +++     +  ++ +++Ckakl++ +  + kw++t ++ eH+H  
  XP_026390820.1  47 LYRKYAVGTGFGCKIRSSKKD--EGILRHVTYTCVKNGKHKIASTT---PFEIDPTGKCECKAKLTIILGVNLKWRITVFVPEHTHRT 129
                     7***************99988..9999**************99877...8889999******************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 139 aa     Download sequence    
MDDDVGSKEN DFGLDETPNE DGRNPKCDIV VPKVGMEFDE VEEVYELYRK YAVGTGFGCK  60
IRSSKKDEGI LRHVTYTCVK NGKHKIASTT PFEIDPTGKC ECKAKLTIIL GVNLKWRITV  120
FVPEHTHRTS PSKNSIHEM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G32250.26e-11FAR1 family protein