PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026390924.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MIKC_MADS
Protein Properties Length: 242aa    MW: 28339 Da    PI: 8.7118
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026390924.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.32.3e-291059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev +iifsstgklye+ss
  XP_026390924.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELSILCDAEVGLIIFSSTGKLYEFSS 59
                    8***********************************************96 PP
2K-box82.59.4e-2882170997
           K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +++++a+ +++e+a L+ +++nLq+++R+l+G++L+sLs keLq+Le+qLe sl+ +R +K++ l++qi+el +k + l++en++L +k
  XP_026390924.1  82 NATSEAKFWKREAATLRHQLQNLQENHRQLMGQELSSLSAKELQNLENQLEMSLRGVRMQKDQKLTDQIHELNRKGNLLHQENMELFRK 170
                     678899********************************************************************************887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGRGKIVIRR IDNTTSRQVT FSKRRNGLLK KAKELSILCD AEVGLIIFSS TGKLYEFSST  60
NMKSIIERYN TSKEDQHHPL MNATSEAKFW KREAATLRHQ LQNLQENHRQ LMGQELSSLS  120
AKELQNLENQ LEMSLRGVRM QKDQKLTDQI HELNRKGNLL HQENMELFRK EHHIRLENMD  180
LLKKNNEARD AHETSRVSHS PNVFNLEEEE DDDDCIILQL SQPQQQNYAT PQNPRTLRLQ  240
LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.14e-89MIKC_MADS family protein