PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026390980.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MIKC_MADS

Protein Properties

Length: 244aa MW: 28484.3 Da PI: 9.4376

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026390980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.6	1.6e-28	10	59	2	51
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n++ rqvtfskRrng+lKKA+ELS+LCdaev ++ifsstgklye+ss XP_026390980.1 10 RIDNTTSRQVTFSKRRNGLLKKAKELSILCDAEVGLMIFSSTGKLYEFSS 59 8***********************************************96 PP
2	K-box	81.3	2.3e-27	82	170	9	97
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 +++++a+ +++e+a L+ +++nLq+++R+l+G++L+sLs keLq+Le+qLe sl+ +R +K++ l++qi+el +k + l++en++L +k XP_026390980.1 82 NATSEAKFWKREAATLRHQLQNLQENHRQLMGQELSSLSAKELQSLENQLEMSLRGVRMQKDQKLTDQIHELNRKGNLLHQENMELFRK 170 678899********************************************************************************887 PP

Sequence ? help Back to Top
Protein Sequence Length: 244 aa Download sequence
MGRGKIVIRR IDNTTSRQVT FSKRRNGLLK KAKELSILCD AEVGLMIFSS TGKLYEFSST 60 NMKSIIERYN TSKEDQHHPL MNATSEAKFW KREAATLRHQ LQNLQENHRQ LMGQELSSLS 120 AKELQSLENQ LEMSLRGVRM QKDQKLTDQI HELNRKGNLL HQENMELFRK EHRIRQENMD 180 LLKKINEASD ARETSRVSHS PNVFNLKEEE EKDDDDCIIL QLSQPQQQNY ATPQNPTALR 240 LQLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37940.1	3e-91	MIKC_MADS family protein