PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026391119.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family HD-ZIP
Protein Properties Length: 325aa    MW: 36853.6 Da    PI: 4.659
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026391119.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.9e-1857110356
                     --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     k+++++ +q+++Le+ Fe ++++  e++ +LA++lgL+ rqV +WFqNrRa++k
  XP_026391119.1  57 KKRRLNIDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAIWFQNRRARWK 110
                     4567899**********************************************9 PP
2HD-ZIP_I/II125.23e-4056148193
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                     ekkrrl+ +qvk+LE++Fe e+kLeperKv+la+eLglqprqva+WFqnrRAR+ktkqlE+dy +Lk++ydalk + +++++++e+L +e++e
  XP_026391119.1  56 EKKRRLNIDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLERDYGVLKASYDALKLKFDAVQQDKEALLSEVRE 148
                     69*************************************************************************************999976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
MKRLNSSDSL GGLISMCHSS AEEKKNNIYS RGFQSMLDGL DEDDIGEESG GHFGTEKKRR  60
LNIDQVKALE KNFEVENKLE PERKVKLAQE LGLQPRQVAI WFQNRRARWK TKQLERDYGV  120
LKASYDALKL KFDAVQQDKE ALLSEVRELK SKLPQEDEIT ESNPMATVKE EMMPMESEHK  180
VVVNDDIHSM ATSLSMVGGG ISSENIDPNH QNCYNDSSNC LVAGIALFRD GSSDSDSSAI  240
LNEDTNAAAN SSSSGVLQQQ HNSCFQFSDS NREINSHQKP YHQQYQQFVR MEEHNFFGGA  300
EETCNYFTDD QAPTLQWCYP DQWDS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15786KKRRLNIDQVKALEKNFEVENKLEPERKVK
2105113RRARWKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G40060.17e-67HD-ZIP family protein