PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026391395.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 511aa    MW: 57802.6 Da    PI: 5.8954
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026391395.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS341.91.1e-1041345103374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL+e+A+a++++++e++q+l++ l+el+sp+gd+ q+la+yf++AL  r+++s++++y++l++ ++++ + +++ +++  f+evsP+ +f+h++
  XP_026391395.1 134 NLLVEAARAIADRNKERVQQLMWMLNELNSPYGDTDQKLASYFLQALFCRMTDSGERCYRTLRSASEKTCSFESTRKVVLKFQEVSPWTTFGHVA 228
                     69************************************************************9888887666666677777************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvlvak.rled 188
                      N aI+ea+ege ++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T++ s++ g    ++ ++e+g r++kfA+ +gvpf+fnv++++ +l++
  XP_026391395.1 229 SNGAIMEAFEGEAKLHIIDISNTYCTQWPTLLEALATRTDDTPHLRLTTIISSAVGtaaVQRVMKEIGTRMEKFARLMGVPFKFNVIHHSgDLSE 323
                     **************************************************997777899999************************988789999 PP

            GRAS 189 le.leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpre 278
                     l+ + eL++k +Eala+n+  +lh++     ++ ++r++vL+++++l+Pk+++vve+ead++ +    +F+++f e+l+y+ + f++l++++ ++
  XP_026391395.1 324 LSfIPELDLKDDEALAINCNGMLHTIG----DVGNQRNTVLSAFRTLNPKIITVVEEEADLDIGvdgfEFVKGFQECLRYFRVYFEALDESFTKT 414
                     973579********************7....66667779*******************99865555669************************** PP

            GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSa 372
                     s+er ++Er+  gr++v+++ac   ++ er+e++++W++rl++ GF+++ +s+++ +++k+llr++k ++ ++ +++++ ++l Wkd+p+v++Sa
  XP_026391395.1 415 SNERLMLERV-AGRALVDLLACPIGASSERRESAARWSHRLRATGFNSLGYSDDVSDDVKALLRRYKeGWSMTQNSDHAGIFLAWKDQPVVWASA 508
                     *********9.********************************************************656566667888999************* PP

            GRAS 373 Wr 374
                     W+
  XP_026391395.1 509 WK 510
                     *8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    
MDTLFRLVSL QQSDQSINTT TTASTRTTST TSRSSNSRQS FNNNNTHCYQ NYTSIQEEEC  60
SNFFMDEDNF SSSSSAKQHL YPSPSSAYHP HQQQQHTPTS TTSSHENQFI NYQNQQPILQ  120
DLSLDLSSSK WSCNLLVEAA RAIADRNKER VQQLMWMLNE LNSPYGDTDQ KLASYFLQAL  180
FCRMTDSGER CYRTLRSASE KTCSFESTRK VVLKFQEVSP WTTFGHVASN GAIMEAFEGE  240
AKLHIIDISN TYCTQWPTLL EALATRTDDT PHLRLTTIIS SAVGTAAVQR VMKEIGTRME  300
KFARLMGVPF KFNVIHHSGD LSELSFIPEL DLKDDEALAI NCNGMLHTIG DVGNQRNTVL  360
SAFRTLNPKI ITVVEEEADL DIGVDGFEFV KGFQECLRYF RVYFEALDES FTKTSNERLM  420
LERVAGRALV DLLACPIGAS SERRESAARW SHRLRATGFN SLGYSDDVSD DVKALLRRYK  480
EGWSMTQNSD HAGIFLAWKD QPVVWASAWK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein