PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392015.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

DBB

Protein Properties

Length: 300aa MW: 32972 Da PI: 5.7153

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	17.2	1.1e-05	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H+++pl XP_026392015.1 4 QCNSCEVAEANVLCCADEAALCWACDVKVHAAnklaskHQRIPL 47 7****99*******************66889999998876 PP
2	zf-B_box	29.8	1.3e-09	54	95	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ ++e +fC +++ llC++C +++H H XP_026392015.1 54 QIPKCDICQEAVGYFFCLEDRALLCRKCDVSIHTAnsyvssH 95 779******9*******************554555556 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MKIQCNSCEV AEANVLCCAD EAALCWACDV KVHAANKLAS KHQRIPLSTS SSSQIPKCDI 60 CQEAVGYFFC LEDRALLCRK CDVSIHTANS YVSSHQRFLL TGVKVGLEPT QPVGLSTKEK 120 SDSVDKTVER ESQSVFRKDT SVSRNGRDGE VLSRQPGGDG SLHATKLSIY GGTTGGSMPE 180 WPLDDFFGLT DFTQNFGYMD NGTSKVDSGK TGESGFSPTL QVTDEDFDMD ECLGKVPEIR 240 WMVPEVPSPP TASGLFWPKS FRNSPDNELS VPDVSFSNQR IPQPIRAQPK ISNPKRQRQY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	4e-91	DBB family protein