PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392111.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 161aa MW: 19036 Da PI: 10.1569

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392111.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.3	5.6e-18	15	70	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 r + ++t++q++ Le++F+ ++++ +++ +LA++lgL+ rqV +W+qN+Ra++k+ XP_026392111.1 15 RLKKRLTEDQVRLLESHFNYEMKLEPDRKIQLARELGLQPRQVAIWYQNKRARWKN 70 667889************************************************95 PP
2	HD-ZIP_I/II	113	1.9e-36	17	107	3	93
HD-ZIP_I/II 3 krrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 k+rl+++qv+lLE++F+ e kLep+rK +lareLglqprqva+W+qn+RAR+k++ lE dy+aL+ ++d++++e++rLe+ev +Lr el++ XP_026392111.1 17 KKRLTEDQVRLLESHFNYEMKLEPDRKIQLARELGLQPRQVAIWYQNKRARWKNQTLELDYKALQLRLDSVAAEKRRLEREVGRLRGELQK 107 9*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence
MAFLQSPNQK QTPKRLKKRL TEDQVRLLES HFNYEMKLEP DRKIQLAREL GLQPRQVAIW 60 YQNKRARWKN QTLELDYKAL QLRLDSVAAE KRRLEREVGR LRGELQKAQD IIIQFNPIHL 120 PPSMNQSLQE EVTCTWENVG QLQVDDLFAC LMGAKVQKLQ N

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	13	20	PKRLKKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-24	HD-ZIP family protein