PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392310.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 589aa MW: 66533.6 Da PI: 10.0774

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392310.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	21.4	5.7e-07	11	46	2	38
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlk 38 ++W t+E++ll av ++G++ W+++a+++ Rt + XP_026392310.1 11 MNWGTWEELLLGGAVIRHGTRAWDAVASELR-SRTIY 46 68****************************.9976 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MMKDTEMIMM MNWGTWEELL LGGAVIRHGT RAWDAVASEL RSRTIYPFSF TPEVCKAKYR 60 DLRKRYCGCK TWFEELRKQR VAELKRELVK SEDSIGSLET KIESLKAEKV EDQLQDNDNI 120 NMVRYDPSPN VSPDSNESTE RIGFHRKETT SNNSKDGLSA SSFTEETRTN WSPVCQVPVA 180 TASNQEMDNL IDTDPEDAKV KPENLRSVEE VCADIQISNL RKRRGKRKRK DCSSIELKKE 240 TSVGENGESD VLSTAEVAMD GPDFDDQSAK LSHRVDQTVV VKGGEKLDLM KIFESFMENE 300 HASMFCSRLD SQKRARYKNT IRRHMDFNTI RAGISNGSIK STRELYRDIL LLTNNAINFY 360 SKNTRQYTFA ISLRNLAKNT FQQIQSVSCL DSGGDSIGGG GDRISCEAQQ FSLPVKPRSI 420 RPHIRKVIGK LVTEERMSPK KEGKKSQPEV EDMLFPPRET KKGKAETTEE VSTSKKDTKK 480 GQTEMGERIT LKLTKKRKTE AEEIIAQKPV NKNSKTEVPK QMIPSRKETK KGSSDAKILV 540 ESPLVALEVV KKTGAGRSKK VGRGNGGGQK PKRVDTDGVV KGRKRTRIR

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MMKDTEMIMM MNWGTWEELL LGGAVIRHGT RAWDAVASEL RSRTIYPFSF TPEVCKAKYR  60
DLRKRYCGCK TWFEELRKQR VAELKRELVK SEDSIGSLET KIESLKAEKV EDQLQDNDNI  120
NMVRYDPSPN VSPDSNESTE RIGFHRKETT SNNSKDGLSA SSFTEETRTN WSPVCQVPVA  180
TASNQEMDNL IDTDPEDAKV KPENLRSVEE VCADIQISNL RKRRGKRKRK DCSSIELKKE  240
TSVGENGESD VLSTAEVAMD GPDFDDQSAK LSHRVDQTVV VKGGEKLDLM KIFESFMENE  300
HASMFCSRLD SQKRARYKNT IRRHMDFNTI RAGISNGSIK STRELYRDIL LLTNNAINFY  360
SKNTRQYTFA ISLRNLAKNT FQQIQSVSCL DSGGDSIGGG GDRISCEAQQ FSLPVKPRSI  420
RPHIRKVIGK LVTEERMSPK KEGKKSQPEV EDMLFPPRET KKGKAETTEE VSTSKKDTKK  480
GQTEMGERIT LKLTKKRKTE AEEIIAQKPV NKNSKTEVPK QMIPSRKETK KGSSDAKILV  540
ESPLVALEVV KKTGAGRSKK VGRGNGGGQK PKRVDTDGVV KGRKRTRIR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	221	231	RKRRGKRKRKD
2	223	233	RKRRGKRKRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42150.1	1e-36	MYB_related family protein