PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026392358.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 979aa MW: 108142 Da PI: 7.4035

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026392358.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.4	6.2e-19	405	504	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++gr+W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_026392358.1 405 FEKMLSASDAGRIGRLVLPKKCAEAYfpTISNPEGLPLKVQDLQGREWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDIVTFSRID-PEGK 497 89************************444556667***********99899999999.*******************987.6666 PP .EEEEE- CS B3 92 lvvkvfr 98 lv++ ++ XP_026392358.1 498 LVMGCRK 504 6666554 PP

Sequence ? help Back to Top
Protein Sequence Length: 979 aa Download sequence
MMSTNSSSSS TKICFNPDCK DTKSERYRKG WRLRTSVYSE LCDRCASAYE EGRFCDIFHS 60 NAAGWRNCES CGKRVHCGCI VSTHAFVLLD AGGVDCMGCA RKNIMMASNQ LWPSSSMPER 120 LKDLSVKNWN SGAGPSAVSG PSPVAGRWLS TPWSAAGAQS EVHPRGDNSS STSLENKKHE 180 DPSEKAPSTS LNLAVVDRFS NGTASLDTIK EFNPFHREDG YVDRQQVLRN LNGTRDPTDA 240 RNGVIAEPGL KSSAPGITVE TFAADVRNRV ISEPGYRRSA STNITFETLT QSFGNVSVQS 300 CPAKDDRSTP YIGLTLPYSH HETNVPNRIS SYQPHLQHPP PLGKPFYPNQ LGGIDLSAEA 360 QIRNGRPRGD VRSRNQSLPR YSPRITDQEL RQISGDSNSV ITPLFEKMLS ASDAGRIGRL 420 VLPKKCAEAY FPTISNPEGL PLKVQDLQGR EWVFQFRFWP NNNSRMYVLE GVTPCIQSMQ 480 LQAGDIVTFS RIDPEGKLVM GCRKASNGPG CDQDNQSSKA GDGIFKSPEG NIRNSKPCEV 540 VSTPLMGGME STSYSSINQF NSEDPTIDWS KVDKSSYIAK DVQCSKPSVL PSKRKSSTLG 600 SRSKRLRMET EDQIELKLTW EEAQGLLRHR RDNAPSVVVI EGHSFEEYEE APIIGRPTIF 660 ITNNVGERNQ WAQCERCSKW RKLPEHALLP SRWICSDNLW DPERSSCSSA QELTLEQLED 720 ILSSTSNDGS KNAKAKNKDS DPVEASEGLG ALANVVTQEN HEAFASTQQT TTRHPRHKPG 780 CTCIVCSQPP SGKGPKHKDT CTCNVCDTVR RRFRTLMERR EKRQLEKEAE TARKKQEENI 840 ENEDDRLISS SKKNKTYASS RKMIKECDEN GIGNKLSSSP FKGGIDLNIQ PEREDEHSTV 900 PDLGDTARTM SHGEQPQMLA SSDGYIELVV NKKEGVGNDA GGAVKLENDG SYGNGRYNLD 960 TDQDHPVTTL VPVSTSTTG

Sequence ? help Back to Top

Protein Sequence Length: 979 aa Download sequence

MMSTNSSSSS TKICFNPDCK DTKSERYRKG WRLRTSVYSE LCDRCASAYE EGRFCDIFHS  60
NAAGWRNCES CGKRVHCGCI VSTHAFVLLD AGGVDCMGCA RKNIMMASNQ LWPSSSMPER  120
LKDLSVKNWN SGAGPSAVSG PSPVAGRWLS TPWSAAGAQS EVHPRGDNSS STSLENKKHE  180
DPSEKAPSTS LNLAVVDRFS NGTASLDTIK EFNPFHREDG YVDRQQVLRN LNGTRDPTDA  240
RNGVIAEPGL KSSAPGITVE TFAADVRNRV ISEPGYRRSA STNITFETLT QSFGNVSVQS  300
CPAKDDRSTP YIGLTLPYSH HETNVPNRIS SYQPHLQHPP PLGKPFYPNQ LGGIDLSAEA  360
QIRNGRPRGD VRSRNQSLPR YSPRITDQEL RQISGDSNSV ITPLFEKMLS ASDAGRIGRL  420
VLPKKCAEAY FPTISNPEGL PLKVQDLQGR EWVFQFRFWP NNNSRMYVLE GVTPCIQSMQ  480
LQAGDIVTFS RIDPEGKLVM GCRKASNGPG CDQDNQSSKA GDGIFKSPEG NIRNSKPCEV  540
VSTPLMGGME STSYSSINQF NSEDPTIDWS KVDKSSYIAK DVQCSKPSVL PSKRKSSTLG  600
SRSKRLRMET EDQIELKLTW EEAQGLLRHR RDNAPSVVVI EGHSFEEYEE APIIGRPTIF  660
ITNNVGERNQ WAQCERCSKW RKLPEHALLP SRWICSDNLW DPERSSCSSA QELTLEQLED  720
ILSSTSNDGS KNAKAKNKDS DPVEASEGLG ALANVVTQEN HEAFASTQQT TTRHPRHKPG  780
CTCIVCSQPP SGKGPKHKDT CTCNVCDTVR RRFRTLMERR EKRQLEKEAE TARKKQEENI  840
ENEDDRLISS SKKNKTYASS RKMIKECDEN GIGNKLSSSP FKGGIDLNIQ PEREDEHSTV  900
PDLGDTARTM SHGEQPQMLA SSDGYIELVV NKKEGVGNDA GGAVKLENDG SYGNGRYNLD  960
TDQDHPVTTL VPVSTSTTG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	819	855	RREKRQLEKEAETARKKQEENIENEDDRLISSSKKNK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-144	B3 family protein