PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026392439.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 581aa    MW: 65150.6 Da    PI: 5.5359
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026392439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS425.83.6e-1302115801373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ecA+a+s++ +   ++l++  +  +s +gdp+qRl ay++e+L ar  +s+s +y +l++++ +    ++ l++++l++e++P++kf++
  XP_026392439.1 211 LKKLLIECARALSENRMDDFDKLVEYARSAVSVSGDPIQRLGAYMVEGLVARKRSSGSVIYGSLNCKQPE---GKDLLSYMRLLYEICPYMKFGY 302
                     5799*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea+ +e++vHiiDf+i qG+QW++L+qaLa+Rp+gpp++RiTg+++p s+  + + l ++g+ La + e++++p+ef++ v    +d
  XP_026392439.1 303 MAANGAIAEAFRNEDQVHIIDFQIAQGTQWITLIQALAARPGGPPHVRITGIDDPVSQyaRGDGLAKVGNMLALMSEKFKIPVEFHP-VPVFASD 396
                     *******************************************************999999**************************.688999* PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ e+L+v++gEa+aVn+ lqlh+++desv+++++rd +L++vkslsPkvv+++eqe+++n+++Fl rf eal++ysa+f+s+++ l+re++eri
  XP_026392439.1 397 ITREMLDVRHGEAVAVNFPLQLHHTPDESVDVTNPRDMLLRMVKSLSPKVVTLIEQESNTNTTPFLMRFREALDFYSAMFESIDTALGRETKERI 491
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     kvE+++l+r+ivnv+aceg+er+erhe l+kWr r+e+aGF+p pls+++++ ++ l++ +++  y++ee +g+++lgW++r+L+s+SaW
  XP_026392439.1 492 KVEEQCLARDIVNVIACEGRERVERHELLGKWRVRFEMAGFRPFPLSSHVNSVIRGLVKSYSQ-SYTLEETDGAMLLGWQNRNLISASAW 580
                     **************************************************************5.5************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    
MDMQQMYSYG VNGVNLSSDS SQDSTPMIPD WIITPMKFDI GGSPNSPLSS QFDCDTFTTP  60
CNSQEQRSST ENLSGVSPAC NSFETDSYYQ TNPSTTYFLN NQERQGSMVF RDVSGAQNMK  120
LALEEIESAL MSPDINENEA TTMGHGEFHG NTRPENLNQR SRPSYNGSPA SQPATYITPK  180
QQKSIRGLKA EKRHRTTEEP QHEIQIPQGN LKKLLIECAR ALSENRMDDF DKLVEYARSA  240
VSVSGDPIQR LGAYMVEGLV ARKRSSGSVI YGSLNCKQPE GKDLLSYMRL LYEICPYMKF  300
GYMAANGAIA EAFRNEDQVH IIDFQIAQGT QWITLIQALA ARPGGPPHVR ITGIDDPVSQ  360
YARGDGLAKV GNMLALMSEK FKIPVEFHPV PVFASDITRE MLDVRHGEAV AVNFPLQLHH  420
TPDESVDVTN PRDMLLRMVK SLSPKVVTLI EQESNTNTTP FLMRFREALD FYSAMFESID  480
TALGRETKER IKVEEQCLAR DIVNVIACEG RERVERHELL GKWRVRFEMA GFRPFPLSSH  540
VNSVIRGLVK SYSQSYTLEE TDGAMLLGWQ NRNLISASAW C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50600.11e-172GRAS family protein