PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393097.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family TCP
Protein Properties Length: 506aa    MW: 55448.6 Da    PI: 7.8473
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP122.93.7e-38992592133
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............................... 65 
                      g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a  ai el+++                               
  XP_026393097.1  99 SGGKDRHSKVLTAKGLRDRRVRLSVSTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAITELPSLnatfpdvpkqllcddkrthhnvnleprldia 193
                     689*************************************************************9999999999999998777777666654433 PP

             TCP  66 ..ssssasec.eaesssssasnsssgkaaksaakskksqksaasalnlak.esrakarararertrekmrik 133
                       +      + ++++ ++ +++++++ + +++a+s+ s++s+ s+l+l++ e r kar+rarert++++ ++
  XP_026393097.1 194 emE------FdTDSAYNQHHQQQQHNLSLSKSACSSTSETSKGSVLSLSRsEIRVKARERARERTAKDKEKE 259
                     331......22222233333333444677788899999999999******99************99988766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    
MEVDDIQSHH QPCKLSRISN SRNDSNKIGR KESAADQYQQ QQQDAEDEEP ADQRKVININ  60
SAMINTTGGT VGGFDIGSND NGRLRAWQSS RIFRVSRASG GKDRHSKVLT AKGLRDRRVR  120
LSVSTAIQFY DLQDRLGYDQ PSKAVEWLIK AAADAITELP SLNATFPDVP KQLLCDDKRT  180
HHNVNLEPRL DIAEMEFDTD SAYNQHHQQQ QHNLSLSKSA CSSTSETSKG SVLSLSRSEI  240
RVKARERARE RTAKDKEKEK PDEAPHHTSS TGRRQQNAQS SSFTELLTGA QHNNSSSLSA  300
AQQNLGFSNF VISKQHRPLA PTQMDYFSGG LFGGGTLRNN NHYSSSGFST QNDYGNASQA  360
TPHTMGVPPP PFTVTADHHQ QQQHPEMHQF SFLSDHLIPD TAAATAANGN EYNLNFTISS  420
GIAGFNRGTL QSNSSQSQLP HHLQPRFSSS PSDGPNMPFF MGNVGNAASS LTPAGNQFPS  480
GFDGRLQLCY GDGGGSHSEM KGKGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.17e-42TCP family protein