PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393399.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 329aa    MW: 36007.9 Da    PI: 7.8145
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393399.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.41.3e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT eE+  l+ +v ++G g W+tI +  +       R+  ++k++w++
   XP_026393399.1  5 KQKWTSEEEAALKAGVVKHGAGKWRTILKDPQfsgilSLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGAPKQKWTS EEEAALKAGV VKHGAGKWRT ILKDPQFSGI LSLRSNVDLK DKWRNMSVTA  60
NGWGSREKAR VALKRSHQMY KNGDDDDDHD GEDDLALSTV VQSDEEVYDV KPLAMTSQNL  120
QINGPKKSLS RLENLILEAI SSLNEPTGSN KTTIGIFIED QYDAPPNFKK ILSAKLKSMT  180
ANKKLIKVKR KYRIAPRPRF PSDGGNPGML GLEGVGQRDI KPDITVRPTK IQVDADLAKM  240
RNMTAEEAAA AAARAVAEAE ASIAEAEEAA READAADVDA EEAQAFAEAA LMTLRNRNAS  300
KMVILHVDES GRRKPVMDAS LQLLSMKAE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.11e-79MYB_related family protein