PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393475.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 466aa    MW: 52462.6 Da    PI: 6.1659
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393475.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS300.34.8e-92574622373
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar..svselykalppsetseknsseelaalkl..fsevsPilk 92 
                     ++lL++cA+a++s+d++laq++L+ l+++a pdgd++qRl+  f++AL +r a   +++ l +a+++++ ++  +++++++ +l  f +++P+++
  XP_026393475.1  57 EQLLVHCANAIESNDATLAQQILWVLNNTAPPDGDSNQRLTCGFLRALISRAAMtgNCKMLTAAMASTHPNHAIHTHKFSVIELasFIDLTPWHR 151
                     79**********************************************99977633666777777666666655777777777788********* PP

            GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg...skeeleetgerLakfAeelgvpfefnvl... 181
                     f++++aN aIlea+eg + vHi+D+++++++Q p+L++a+a+Rpegpp +++T+ +  +        ++e +g +L +fA++ +v +ef+v+   
  XP_026393475.1 152 FGFVAANAAILEAIEGFSVVHIVDLSLTHCMQIPTLIDAIANRPEGPPFIKLTVSSCDADIppmLDISYEDLGAKLVNFARSRNVGMEFKVIpss 246
                     *****************************************************9888555588888999***********************999 PP

            GRAS 182 ....vakrledleleeLrvkp...gEalaVnlvlqlhrll....................desvsleserdevLklvkslsPkvvvvveqeadhn 249
                          a+ +e l++++L +      Eal++n++++lh+++                    ++++s    r+++Lk+++sl+P++vv+v+++ad +
  XP_026393475.1 247 yadgFASLIEHLRVQQLVFTDrnePEALVINSHMKLHYTPdetlgeihhhspyysmepsfSSTTS---LRSAFLKALRSLNPTIVVLVDEDADFT 338
                     7777777788889999976667779*****************************99854444444...566************************ PP

            GRAS 250 sesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkv 344
                     s++++ r+ +a+++ +  +d++++ + r s+++ ++E+  l ++i+nv+a+e  +r+er e+++kW +r+++a F+ +++se+a+++++++l ++
  XP_026393475.1 339 STNLVSRLRSAFNFLWIPYDAVDTCIRRGSKQMEWYEAD-LCWKIENVIAQEDVQRVERLESKSKWVQRMRNANFRGISFSEEAVTEIRHMLDEH 432
                     ***************************************.99***************************************************** PP

            GRAS 345 k.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                     + ++g + e+e++ lvl+Wk++++v+++aW
  XP_026393475.1 433 AaGWGLKKEDEEDHLVLTWKGHNVVFATAW 462
                     *9**************************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 466 aa     Download sequence    
MQFTETPPPP LHQNSITPCS NFIMNNNNQF HRTRPWPGFS TPTNKALGSV KDANCMEQLL  60
VHCANAIESN DATLAQQILW VLNNTAPPDG DSNQRLTCGF LRALISRAAM TGNCKMLTAA  120
MASTHPNHAI HTHKFSVIEL ASFIDLTPWH RFGFVAANAA ILEAIEGFSV VHIVDLSLTH  180
CMQIPTLIDA IANRPEGPPF IKLTVSSCDA DIPPMLDISY EDLGAKLVNF ARSRNVGMEF  240
KVIPSSYADG FASLIEHLRV QQLVFTDRNE PEALVINSHM KLHYTPDETL GEIHHHSPYY  300
SMEPSFSSTT SLRSAFLKAL RSLNPTIVVL VDEDADFTST NLVSRLRSAF NFLWIPYDAV  360
DTCIRRGSKQ MEWYEADLCW KIENVIAQED VQRVERLESK SKWVQRMRNA NFRGISFSEE  420
AVTEIRHMLD EHAAGWGLKK EDEEDHLVLT WKGHNVVFAT AWVPSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49950.11e-176GRAS family protein