PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393592.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family MYB_related
Protein Properties Length: 438aa    MW: 50006.8 Da    PI: 4.5475
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393592.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding322.9e-10271313246
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                       rW++++ +l++++++q+G++ +++I + ++ gR + q+ks++ k
   XP_026393592.1 271 ERWSKQDTDLFYEGIQQFGTD-FTLIQQLFP-GRARAQVKSKYKK 313
                      69*******************.*********.***********87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 438 aa     Download sequence    
MDDRRLEKEV EAFDNFTSEV TPDMGNVHLV RPVNESLEED LTLATKDLEH RAEISFPNVV  60
THEDFGVSQA GHMISRTEDD QPILAASKEI EIGRSSRQLR NKVVPLVATD GTAEDFTVNE  120
NDDNDESFNG KDTPNLKNTC QTSEKLTGSG RRKAAEGSET LNKEPPKKKF SHSTRRNKRR  180
VDKVLLETPE DEINPRKLML KDLILLAEAK ERLLVADPNA ANNSSPYQST TFTQDTHFEE  240
EVPFAYEEDQ AERFVQPKLN YHTFMNKTST ERWSKQDTDL FYEGIQQFGT DFTLIQQLFP  300
GRARAQVKSK YKKEEQQHPK RLFDALTNRS KNHSHFELVI ERLQKSAADA EAEHDSDRDN  360
ESVGITGEEV EITPNTNEEV SKKPDENETN FEEEEVGEGM MEAEQVAIMN HQGHSPAKSH  420
QESEGDVYDI WSEYKSDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.11e-43MYB_related family protein