PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393685.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family DBB
Protein Properties Length: 190aa    MW: 21224 Da    PI: 6.5828
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box23.61.1e-07333434
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeH 34
                    ++C+ +e   ++lfC  ++  lC  C +++H
  XP_026393685.1  3 TICDVCEGAAATLFCAADEAALCVPCDEKIH 33
                    68******99********************9 PP
2zf-B_box28.92.4e-095492438
        zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                    ++C+ +e+ ++ ++Ce +++ lC +C ++ H g    H+
  XP_026393685.1 54 PRCDICENAPAFFYCEIDGTSLCLQCDMTVHVGgkrtHE 92
                    89*****************************66666776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 190 aa     Download sequence    
MRTICDVCEG AAATLFCAAD EAALCVPCDE KIHLCNKLAS RHVRVGLAEP SVVPRCDICE  60
NAPAFFYCEI DGTSLCLQCD MTVHVGGKRT HERFLLLRQR AEFPVDKSSN SDDQQRQPVN  120
PRENRWHPPE MTVKTHEQNK ASAIPISNGH KDDNHHKMDI KMIDLNTRPN NRINEQASSS  180
QGMDVLSGNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.13e-71DBB family protein