PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026393724.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 340aa    MW: 38434.1 Da    PI: 6.7127
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026393724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B330.66e-1050132990
                     HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTE..EEE-TT.HHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgr..yvltkG.WkeFvkangLkegDfvvFkldgrsef 90 
                        + g+l++p +f+++hg +   s  +tl+ ++g +W+v+l+   +  +g   + ++ G   +F +   +++g  ++Fk++g+s+f
  XP_026393724.1  50 AIIQDGNLIIPPRFVAKHGAD--LSHHVTLRVPDGLTWDVQLKRdsN--GGNgaVSFRIGqLDQFFEYYSIRAGHLLLFKYHGNSQF 132
                     5567789***********977..7889***************76433..33356777755279******************999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAITRNQRAT RTPGTDLSNS QGNFVASADD DGTNEIGRRH PQFFQIIHNA IIQDGNLIIP  60
PRFVAKHGAD LSHHVTLRVP DGLTWDVQLK RDSNGGNGAV SFRIGQLDQF FEYYSIRAGH  120
LLLFKYHGNS QFLGIILDIS ACEIKYPAAD DDDDHRGSSE IKSSEEEDYY VHASTDEDES  180
SASLLSSSSE EKEVAVVEKK KKKHTHLKSK AEDSSMRGMR QRATLIGDEF QSENPFFTLA  240
LQPAYIKRKY LQIPTSFNDM HMFTPGKKIR AQVKDGSEDF WILGFPRERK PDERRLTVGV  300
APLLKDNYLN AGDVILVELM KDMKSSYLDA KVHIFRANRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.12e-20B3 family protein