PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026394215.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family GRAS
Protein Properties Length: 614aa    MW: 68147.5 Da    PI: 4.8429
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026394215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS368.11.2e-1122416142374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalklfsevsPilkfs 94 
                      + LlecA  +s+++ e a +lL+r++e +s+ gdp++R+a+yf e L +rl +  ++++k+ p ++ ++ +  s+e++ ++k++++++P+ kfs
  XP_026394215.1 241 LKSLLECAL-ISESEPEHAIKLLNRVRESVSELGDPTERVAFYFSEVLYNRLIS--PKISKTHPLTDFDQAScsSEEVTLSYKTLNDACPYSKFS 332
                     5789***97.88999***************************************..999999888888776676999999*************** PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrl 186
                     hltaNqaIlea+e+++++Hi+Df+i qGlQW+aLlqaLa+R+ ++p ++Ri g+ +p+ g   + +l +tg+rL++fA+ l+++fef++ + + +
  XP_026394215.1 333 HLTANQAILEATESASCIHIVDFGIVQGLQWAALLQALATRSfGKPTMIRISGIPAPTLGrsPAASLLATGNRLRDFAKLLDLNFEFEP-ILTPI 426
                     ******************************************66677**********99999999************************.799** PP

            GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpresee 281
                     ++l+ +++rv+++E+laVn++lql++lld++ +  +   + Lkl ksl+Pkvv++ e ea++n+ s+++rf +al+yy a+f+sle +l+r+s+e
  XP_026394215.1 427 HELNESSFRVEKNEVLAVNFMLQLYNLLDSTNCAVE---RALKLAKSLNPKVVTLGEYEASLNHVSYVDRFKNALKYYLAVFESLEPSLARDSSE 518
                     ****************************99998888...9******************************************************* PP

            GRAS 282 rikvErellgreivnvvace.gaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaW 373
                     ri vEr llgr+i  vv  e g  r+er+e++++W+  +e++GF++ pls++ ++qa+ ll +++ s  y+++e+   l+ l W d pL +vS+W
  XP_026394215.1 519 RIRVERLLLGRRIAGVVGPEeGPVRQERMEEYAQWKVLMEACGFESFPLSHYSVSQARILLWNYNySSKYSIKESAPGLLsLAWDDIPLHTVSSW 613
                     *****************9761566*****************************************9999******999999************** PP

            GRAS 374 r 374
                     r
  XP_026394215.1 614 R 614
                     8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 614 aa     Download sequence    
MAYMCTDSGN LMAIAQQVIQ QKQQQQQQQL QQQQQQEIHQ QQQQFMGVNP FSWCVQTQNP  60
SPPSSFGFGL TGAEPYTVGV GGGGCVSDAG GDESDPLSSF PHLDHHSIGF RLADEFESDD  120
WMETLINGGG GGHGNEDSPE SSELAFYNNN DPFVTCSSRL STQSSNPSSD LCPPLIFPSD  180
TQQKNPNLLQ SHHQHQLPTW VPTPVLQPQD LPSLQNSSSL LQKPQVLSQS SSEAESISPL  240
LKSLLECALI SESEPEHAIK LLNRVRESVS ELGDPTERVA FYFSEVLYNR LISPKISKTH  300
PLTDFDQASC SSEEVTLSYK TLNDACPYSK FSHLTANQAI LEATESASCI HIVDFGIVQG  360
LQWAALLQAL ATRSFGKPTM IRISGIPAPT LGRSPAASLL ATGNRLRDFA KLLDLNFEFE  420
PILTPIHELN ESSFRVEKNE VLAVNFMLQL YNLLDSTNCA VERALKLAKS LNPKVVTLGE  480
YEASLNHVSY VDRFKNALKY YLAVFESLEP SLARDSSERI RVERLLLGRR IAGVVGPEEG  540
PVRQERMEEY AQWKVLMEAC GFESFPLSHY SVSQARILLW NYNYSSKYSI KESAPGLLSL  600
AWDDIPLHTV SSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-172GRAS family protein