PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394340.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

DBB

Protein Properties

Length: 320aa MW: 35278.2 Da PI: 6.735

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394340.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.3	2.3e-06	4	45	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg.......Htv 39 C+ +++ e+ fC ++ lC+ C H+ H++ XP_026394340.1 4 QCDVCSKDEAAVFCSADEAALCNGCDHRVHHAnklaskhHRF 45 7****99******************6445888886666 PP
2	zf-B_box	29.3	1.8e-09	56	97	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e ++C+ ++e ++ lfC++++ lC++C ++H H XP_026394340.1 56 EIPRCDICQERRAFLFCREDRAILCRECDISIHTAneltkkH 97 6799*****************************545555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MKIQCDVCSK DEAAVFCSAD EAALCNGCDH RVHHANKLAS KHHRFSLLHP SSSSSEIPRC 60 DICQERRAFL FCREDRAILC RECDISIHTA NELTKKHNRF LLTGVKLSST SEVFPSGSTS 120 TTITSTSATN IDRDLAASAD SNNIKNMITA SKNKTAPSVH TSTNSFATVL PSTVLPSKYC 180 DHSGPTSGGS TSSISEYLME TLPGWQVEDF LVDSSPTPTH GNGFCKDEAD LHPYLDANYF 240 DNQSNSQGYV VSEDLSLWVP ETPVNPTYPF DGRENGLNLK EFVKETPIMS SKQVNRRRSD 300 HGFTVPSISP PSNKRSRHNW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75540.1	1e-76	DBB family protein