PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026394464.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 347aa    MW: 38010.1 Da    PI: 4.8801
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026394464.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.00061298339854
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     + r RR+r+++    L+ l+P       k  + +++  +A++YIksL
  XP_026394464.1 298 NKRLRRERVRETVRILQNLIPGG-----KDKDAIMVIDEAIQYIKSL 339
                     5699*****************97.....33678*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MEKDLQLSNL NSPGFTLDSN PGDYLRTYTN RYPSMVPRNA SLLGYNAAGL PQSKIGQVNE  60
PNGWFYCLPR HRQTLTPLPN SAPKELASSP YRHGGVDGCG AGAVPSSLAG SDQKRFLVFD  120
QSGDQTSLFY SSAVGSNVRH PCHDGAKSLH ITGSQKDDLT SNRELIPHGQ VASVPLEESQ  180
ESGDKSEMHE DTEELNALLY SDDECDSDDE EISTGHSPHD VIGCQDLEEV GENLVDIVSS  240
ACPTKRKRVL EEDHYNASLL DTASSGLANH SVECNDDAES SCAGGSMRQK DMESLPVNKR  300
LRRERVRETV RILQNLIPGG KDKDAIMVID EAIQYIKSLK FKARSMK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1300305RLRRER