PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394719.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB

Protein Properties

Length: 1128aa MW: 127072 Da PI: 8.1719

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.1	2e-13	452	497	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+e+d +l av+ +G ++W +Ia m gRt+ qc +rw+k l XP_026394719.1 452 RDWTEEDDSQLRTAVEAFGANNWQLIAFNME-GRTGTQCSNRWLKTL 497 57***************************.*********9975 PP
2	Myb_DNA-binding	55	1.9e-17	505	549	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 grWT eEd++l+ av ++Gg+tW++Ia+ ++ gRt qc++rw + XP_026394719.1 505 GRWTVEEDKRLKVAVLLFGGKTWAKIAQFIP-GRTQAQCRERWVNC 549 8****************************.*********986 PP
3	Myb_DNA-binding	44.2	4.4e-14	558	598	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eEd +l+ av+++G W+++a+ m+ gRt+ c rw XP_026394719.1 558 PWTEEEDCQLKAAVEEYGHC-WSKVAASMP-GRTDSKCLRRWK 598 8***************99.*****.*********6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1128 aa Download sequence
MAILEDVNSC SEDERDEGLD EDIEALRAAC LLTGNTPDEE EIEEDVRNDT TRISIPSDKN 60 DNPIPIHEDV HDDDDDFELV RSIRKKFSTI PPEDGAVFMK PLNSLPPFVA SDGENDDFET 120 LRVVRRRFCD YDADLENPDA PRELLSSSEE ACNIYQPSEI PCSGTQNQSS KLIKWHQSEA 180 GFPNPEAARL FVEALRKNRS CQKFIRSKLL QIEAKIEENK KLKERVKILK DFQVACKQRA 240 GRAVSLRKDP RIQLISVLKF RNSQTTKANS KKAGAISFGP VENSHVAKYR MAMKRFPLCL 300 SRPRWTQTEK DNLWKGIKQQ FQEMLLQESI EGFSASGDSN DLDDIMASIA DFEVTPENVR 360 TFLPKVDWER LASTYVTGRS GAECEQRWLN VEDPLINHSP WTKNEDKKLL YILQQGGIYN 420 WINISITLGT NRTPFQCLAR FQRSLNANII KRDWTEEDDS QLRTAVEAFG ANNWQLIAFN 480 MEGRTGTQCS NRWLKTLNPA RKRVGRWTVE EDKRLKVAVL LFGGKTWAKI AQFIPGRTQA 540 QCRERWVNCL DPSLNLKPWT EEEDCQLKAA VEEYGHCWSK VAASMPGRTD SKCLRRWKFL 600 FPHEVPLIQA AKRIKRSALI SNFVDRESER PALDHNDFVA LPGPESVLAL ESGTTAGKEK 660 KSRRKPKLKA AKDLVPCDNI PKRRSSKRSR SEAQMCRGGD SRMQIADDGE TCGEDGTISQ 720 KKKSTIRRCS KKNHRESTDL GNNQLIPEDS TTSMITESED KIEDGTVLRR KRKAPYRHLK 780 KNHSINIDSG NVSLLPEEST TLRITVGDDN TANCGEDGAG SRKKKRMPNK RLKNNQSTNA 840 DSGDIPLLPE DLTVGDDNTA NCREDDTGSR KKKRTPNKRL KNNQSTNADS GDIPLLPEDL 900 TIGDDNTANC GEDDCILGRK KEAPSSRLKK IQCTDSASGD QDISLVTEDS TVLRIGNGDV 960 SIDKSGAISG MKKRVSKRNP KYIQSTNTIS GSKDVPEKLA ILKITKREKR SVNQGEVGVA 1020 PGNEKTASSK RFKRNRSTEH DSSLMDEDLT VASIAYAISR KKKRSINKRL KTNNCIQPAS 1080 ANIDNSLCPE DTSIRIRDSE DNYNKKVVDD DGNVVLTEDF TEREMPNS

Sequence ? help Back to Top

Protein Sequence Length: 1128 aa Download sequence

MAILEDVNSC SEDERDEGLD EDIEALRAAC LLTGNTPDEE EIEEDVRNDT TRISIPSDKN  60
DNPIPIHEDV HDDDDDFELV RSIRKKFSTI PPEDGAVFMK PLNSLPPFVA SDGENDDFET  120
LRVVRRRFCD YDADLENPDA PRELLSSSEE ACNIYQPSEI PCSGTQNQSS KLIKWHQSEA  180
GFPNPEAARL FVEALRKNRS CQKFIRSKLL QIEAKIEENK KLKERVKILK DFQVACKQRA  240
GRAVSLRKDP RIQLISVLKF RNSQTTKANS KKAGAISFGP VENSHVAKYR MAMKRFPLCL  300
SRPRWTQTEK DNLWKGIKQQ FQEMLLQESI EGFSASGDSN DLDDIMASIA DFEVTPENVR  360
TFLPKVDWER LASTYVTGRS GAECEQRWLN VEDPLINHSP WTKNEDKKLL YILQQGGIYN  420
WINISITLGT NRTPFQCLAR FQRSLNANII KRDWTEEDDS QLRTAVEAFG ANNWQLIAFN  480
MEGRTGTQCS NRWLKTLNPA RKRVGRWTVE EDKRLKVAVL LFGGKTWAKI AQFIPGRTQA  540
QCRERWVNCL DPSLNLKPWT EEEDCQLKAA VEEYGHCWSK VAASMPGRTD SKCLRRWKFL  600
FPHEVPLIQA AKRIKRSALI SNFVDRESER PALDHNDFVA LPGPESVLAL ESGTTAGKEK  660
KSRRKPKLKA AKDLVPCDNI PKRRSSKRSR SEAQMCRGGD SRMQIADDGE TCGEDGTISQ  720
KKKSTIRRCS KKNHRESTDL GNNQLIPEDS TTSMITESED KIEDGTVLRR KRKAPYRHLK  780
KNHSINIDSG NVSLLPEEST TLRITVGDDN TANCGEDGAG SRKKKRMPNK RLKNNQSTNA  840
DSGDIPLLPE DLTVGDDNTA NCREDDTGSR KKKRTPNKRL KNNQSTNADS GDIPLLPEDL  900
TIGDDNTANC GEDDCILGRK KEAPSSRLKK IQCTDSASGD QDISLVTEDS TVLRIGNGDV  960
SIDKSGAISG MKKRVSKRNP KYIQSTNTIS GSKDVPEKLA ILKITKREKR SVNQGEVGVA  1020
PGNEKTASSK RFKRNRSTEH DSSLMDEDLT VASIAYAISR KKKRSINKRL KTNNCIQPAS  1080
ANIDNSLCPE DTSIRIRDSE DNYNKKVVDD DGNVVLTEDF TEREMPNS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	683	689	RRSSKRS
2	823	833	KKKRMPNKRLK
3	871	881	KKKRMPNKRLK
4	1061	1071	KKKRMPNKRLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	0.0	MYB family protein