PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026394965.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARF

Protein Properties

Length: 1068aa MW: 117251 Da PI: 6.7539

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026394965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	74.4	1.3e-23	126	227	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ ++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F +++ XP_026394965.1 126 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNE 216 99***************************8544444..48********************************************..888 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 + +l+++++r+ XP_026394965.1 217 KNQLFLGIRRA 227 9999*9986 PP
2	Auxin_resp	116.6	2.2e-38	252	335	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+t+s F+++YnPras+seFv+++ ++ ka++ ++vsvGmRf+m fete+ss rr++Gt++gvsdld+vrWpnS+Wrs+k XP_026394965.1 252 AAHAAATNSRFTIFYNPRASPSEFVIPLTRFAKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGVSDLDTVRWPNSHWRSVK 335 79*******************************9789****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1068 aa Download sequence
MRLSSSGLNQ QTQEEKRCLN SELWHACAGP LVSLPALGSR VVYFPQGHSE QVAASTNKEV 60 DAHIPNYPNL SPQLICLLHN VTMHADVETD EVYAQMTLQP LSPQEQKDAY LPADMGTANK 120 QPTNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDFSQQ PPAQELIARD LHDNEWKFRH 180 IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV LFIWNEKNQL FLGIRRAHRP QTVMPSSVLS 240 SDSMHIGLLA AAAHAAATNS RFTIFYNPRA SPSEFVIPLT RFAKAVYHTR VSVGMRFRML 300 FETEESSVRR YMGTITGVSD LDTVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT 360 FPMYPSPFPL RLKRPWPSGI PPFHGKDDDL GVSSPLMWLQ GDSGDRALQS LNFQGLGPWM 420 QQPRLDASML GLQPDMYQAM AAAALQEMRT VDACKQGPTS LLQFPQPQNV SSISDIMQTQ 480 RLPQSQTQNS FLQGIHGGQT QIQAQGHAQA QAPAQPQAQL QSLTQAQIQA LAQAQVQAFT 540 QAQVQALTQA QGQALIQAQS QAQAQAQAQS QAHAHAQAQA QSQAHAQAQA QAQSQAHAQA 600 QAQAQGQSQS QAQSQPQAQS QSQSHSQSQS QPQSQSHSQS PSRAKAQTQV QVQSQVHAQA 660 QAQAHAQSQV HSQAQLHAQA QLLHQQLKQR HSFNDQQFHQ LQLQHQQQIS DQQHQQQQNP 720 NNASALSQMP SASLSPTASL QTISSHRQQN FADSSGVPAS TSAVSPLHSL LGSYSQEEAS 780 HLLNLPRTSP LVSSGGWPSK RPAVESLHPS AAAVQNGLSH VDQLEPRQSN ESQNSISLPP 840 FPGRECSVDQ EGGRDPHNHT LFGINIDSAS LLMQNEMPNL RVISGGETDS TTSPFAASNF 900 LGSAGADFPI NPTSSCLDES GFLQSPDNVG QVNPPTRTFV KVHKSGSFGR SLDISKFSNY 960 HDLRGELARM FGLEGQLEDP LRSGWQLVFV DRENDVLLLG DDPWQEFVNN VWCIKILSPQ 1020 EVQQMGNQDL EVLNSVQRLS GGGSSSCDDD YVNHQDSRNL TNGIALDY

Sequence ? help Back to Top

Protein Sequence Length: 1068 aa Download sequence

MRLSSSGLNQ QTQEEKRCLN SELWHACAGP LVSLPALGSR VVYFPQGHSE QVAASTNKEV  60
DAHIPNYPNL SPQLICLLHN VTMHADVETD EVYAQMTLQP LSPQEQKDAY LPADMGTANK  120
QPTNYFCKTL TASDTSTHGG FSVPRRAAEK VFPPLDFSQQ PPAQELIARD LHDNEWKFRH  180
IFRGQPKRHL LTTGWSVFVS AKRLVAGDSV LFIWNEKNQL FLGIRRAHRP QTVMPSSVLS  240
SDSMHIGLLA AAAHAAATNS RFTIFYNPRA SPSEFVIPLT RFAKAVYHTR VSVGMRFRML  300
FETEESSVRR YMGTITGVSD LDTVRWPNSH WRSVKVGWDE STAGERQPRV SLWEIEPLTT  360
FPMYPSPFPL RLKRPWPSGI PPFHGKDDDL GVSSPLMWLQ GDSGDRALQS LNFQGLGPWM  420
QQPRLDASML GLQPDMYQAM AAAALQEMRT VDACKQGPTS LLQFPQPQNV SSISDIMQTQ  480
RLPQSQTQNS FLQGIHGGQT QIQAQGHAQA QAPAQPQAQL QSLTQAQIQA LAQAQVQAFT  540
QAQVQALTQA QGQALIQAQS QAQAQAQAQS QAHAHAQAQA QSQAHAQAQA QAQSQAHAQA  600
QAQAQGQSQS QAQSQPQAQS QSQSHSQSQS QPQSQSHSQS PSRAKAQTQV QVQSQVHAQA  660
QAQAHAQSQV HSQAQLHAQA QLLHQQLKQR HSFNDQQFHQ LQLQHQQQIS DQQHQQQQNP  720
NNASALSQMP SASLSPTASL QTISSHRQQN FADSSGVPAS TSAVSPLHSL LGSYSQEEAS  780
HLLNLPRTSP LVSSGGWPSK RPAVESLHPS AAAVQNGLSH VDQLEPRQSN ESQNSISLPP  840
FPGRECSVDQ EGGRDPHNHT LFGINIDSAS LLMQNEMPNL RVISGGETDS TTSPFAASNF  900
LGSAGADFPI NPTSSCLDES GFLQSPDNVG QVNPPTRTFV KVHKSGSFGR SLDISKFSNY  960
HDLRGELARM FGLEGQLEDP LRSGWQLVFV DRENDVLLLG DDPWQEFVNN VWCIKILSPQ  1020
EVQQMGNQDL EVLNSVQRLS GGGSSSCDDD YVNHQDSRNL TNGIALDY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein