PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026395238.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 504aa MW: 56567.2 Da PI: 6.9673

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026395238.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.9	1.5e-20	180	233	1	55
G2-like 1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ peLH++Fvea +LG +kA+P++il m+v+gLt+e+v+SHLQkYR XP_026395238.1 180 KTRISWAdPELHAKFVEAFYKLG--DKAVPSKILVEMNVQGLTREKVASHLQKYRK 233 6899758*********4..89**************************5 PP
2	Myb_DNA-binding	28.5	3.6e-09	188	232	6	48
HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +e++ ++v+a+ +lG + +++I +m+ +g+t++ + s++qky+ XP_026395238.1 188 PELHAKFVEAFYKLGDKaVPSKILVEMNvQGLTREKVASHLQKYR 232 8************99*************************7 PP
3	Response_reg	76	1.4e-25	14	122	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+ l ++ll+++l+k +y ev+++ ++ +a ll++++ +D++++D++m +m+G+ellk+i e ++p+i+++++g+ e++ + ++ G XP_026395238.1 14 VLAVDDSSLCLKLLESLLKKCRY-EVTATLSANAAFGLLRKNKknFDIVITDVQMDEMNGFELLKTIGLEM-DIPVIMMSTSGDYETVMKGIEHG 106 799******************.***********777778******************6654.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l+Kp + +e+ + XP_026395238.1 107 ACDYLVKPPSLKEIQN 122 ******98888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 504 aa Download sequence
MEFMNDKFPE GLRVLAVDDS SLCLKLLESL LKKCRYEVTA TLSANAAFGL LRKNKKNFDI 60 VITDVQMDEM NGFELLKTIG LEMDIPVIMM STSGDYETVM KGIEHGACDY LVKPPSLKEI 120 QNIWQHVVRL KKNKSTLSAP DTEKKGTERN LRRKNNNQTK NNEDEDSSHS SDELLPNQKK 180 TRISWADPEL HAKFVEAFYK LGDKAVPSKI LVEMNVQGLT REKVASHLQK YRKILEKQSK 240 KPNSITTFNG MSGRLRNSTF PSLLNLQFQN GRNYLSSSQS YHRGTSQLSH YGVTPNASNR 300 SSVNPHPHFL PSTQPYTSQY SSTLGTINQN PQKIQVSDST MHNLHNQTYA SGLNAQTFSS 360 SSKLFDPHMV SSSKFPDYNA NIHSGTSNFQ FGEASNVLAN NNLFDDLTYY PMLDHASSSN 420 LNTVFQSDYT FNMTHSTLSG YDDGMRNMIA PTIPSTNVME SQSVDQIPSL ENPLAFLETD 480 SDHLGSYSSA DDDLSAAIRP YQQQ

Sequence ? help Back to Top

Protein Sequence Length: 504 aa Download sequence

MEFMNDKFPE GLRVLAVDDS SLCLKLLESL LKKCRYEVTA TLSANAAFGL LRKNKKNFDI  60
VITDVQMDEM NGFELLKTIG LEMDIPVIMM STSGDYETVM KGIEHGACDY LVKPPSLKEI  120
QNIWQHVVRL KKNKSTLSAP DTEKKGTERN LRRKNNNQTK NNEDEDSSHS SDELLPNQKK  180
TRISWADPEL HAKFVEAFYK LGDKAVPSKI LVEMNVQGLT REKVASHLQK YRKILEKQSK  240
KPNSITTFNG MSGRLRNSTF PSLLNLQFQN GRNYLSSSQS YHRGTSQLSH YGVTPNASNR  300
SSVNPHPHFL PSTQPYTSQY SSTLGTINQN PQKIQVSDST MHNLHNQTYA SGLNAQTFSS  360
SSKLFDPHMV SSSKFPDYNA NIHSGTSNFQ FGEASNVLAN NNLFDDLTYY PMLDHASSSN  420
LNTVFQSDYT FNMTHSTLSG YDDGMRNMIA PTIPSTNVME SQSVDQIPSL ENPLAFLETD  480
SDHLGSYSSA DDDLSAAIRP YQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-57	ARR-B family protein