PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026395243.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 471aa MW: 52724.7 Da PI: 7.3147

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026395243.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65	1.3e-20	147	200	1	55
G2-like 1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ peLH++Fvea +LG +kA+P++il m+v+gLt+e+v+SHLQkYR XP_026395243.1 147 KTRISWAdPELHAKFVEAFYKLG--DKAVPSKILVEMNVQGLTREKVASHLQKYRK 200 6899758*********4..89**************************5 PP
2	Myb_DNA-binding	28.6	3.2e-09	155	199	6	48
HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +e++ ++v+a+ +lG + +++I +m+ +g+t++ + s++qky+ XP_026395243.1 155 PELHAKFVEAFYKLGDKaVPSKILVEMNvQGLTREKVASHLQKYR 199 8************99*************************7 PP
3	Response_reg	57.7	6.7e-20	4	89	25	109
EEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 25 evaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 +v+++ ++ +a ll++++ +D++++D++m +m+G+ellk+i e ++p+i+++++g+ e++ + ++ Ga d+l+Kp + +e+ + XP_026395243.1 4 QVTATLSANAAFGLLRKNKknFDIVITDVQMDEMNGFELLKTIGLEM-DIPVIMMSTSGDYETVMKGIEHGACDYLVKPPSLKEIQN 89 578888999999999777777********************6654.8****************************98888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MKSQVTATLS ANAAFGLLRK NKKNFDIVIT DVQMDEMNGF ELLKTIGLEM DIPVIMMSTS 60 GDYETVMKGI EHGACDYLVK PPSLKEIQNI WQHVVRLKKN KSTLSAPDTE KKGTERNLRR 120 KNNNQTKNNE DEDSSHSSDE LLPNQKKTRI SWADPELHAK FVEAFYKLGD KAVPSKILVE 180 MNVQGLTREK VASHLQKYRK ILEKQSKKPN SITTFNGMSG RLRNSTFPSL LNLQFQNGRN 240 YLSSSQSYHR GTSQLSHYGV TPNASNRSSV NPHPHFLPST QPYTSQYSST LGTINQNPQK 300 IQVSDSTMHN LHNQTYASGL NAQTFSSSSK LFDPHMVSSS KFPDYNANIH SGTSNFQFGE 360 ASNVLANNNL FDDLTYYPML DHASSSNLNT VFQSDYTFNM THSTLSGYDD GMRNMIAPTI 420 PSTNVMESQS VDQIPSLENP LAFLETDSDH LGSYSSADDD LSAAIRPYQQ Q

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MKSQVTATLS ANAAFGLLRK NKKNFDIVIT DVQMDEMNGF ELLKTIGLEM DIPVIMMSTS  60
GDYETVMKGI EHGACDYLVK PPSLKEIQNI WQHVVRLKKN KSTLSAPDTE KKGTERNLRR  120
KNNNQTKNNE DEDSSHSSDE LLPNQKKTRI SWADPELHAK FVEAFYKLGD KAVPSKILVE  180
MNVQGLTREK VASHLQKYRK ILEKQSKKPN SITTFNGMSG RLRNSTFPSL LNLQFQNGRN  240
YLSSSQSYHR GTSQLSHYGV TPNASNRSSV NPHPHFLPST QPYTSQYSST LGTINQNPQK  300
IQVSDSTMHN LHNQTYASGL NAQTFSSSSK LFDPHMVSSS KFPDYNANIH SGTSNFQFGE  360
ASNVLANNNL FDDLTYYPML DHASSSNLNT VFQSDYTFNM THSTLSGYDD GMRNMIAPTI  420
PSTNVMESQS VDQIPSLENP LAFLETDSDH LGSYSSADDD LSAAIRPYQQ Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	8e-51	ARR-B family protein