PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026395244.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 438aa MW: 49119.5 Da PI: 6.8441

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026395244.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	65.2	1.2e-20	114	167	1	55
G2-like 1 kprlrWt.peLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+ W+ peLH++Fvea +LG +kA+P++il m+v+gLt+e+v+SHLQkYR XP_026395244.1 114 KTRISWAdPELHAKFVEAFYKLG--DKAVPSKILVEMNVQGLTREKVASHLQKYRK 167 6899758*********4..89**************************5 PP
2	Myb_DNA-binding	28.8	2.9e-09	122	166	6	48
HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 6 teEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 +e++ ++v+a+ +lG + +++I +m+ +g+t++ + s++qky+ XP_026395244.1 122 PELHAKFVEAFYKLGDKaVPSKILVEMNvQGLTREKVASHLQKYR 166 8************99*************************7 PP
3	Response_reg	32.1	5.9e-12	1	56	53	109
CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 m +m+G+ellk+i e ++p+i+++++g+ e++ + ++ Ga d+l+Kp + +e+ + XP_026395244.1 1 MDEMNGFELLKTIGLEM-DIPVIMMSTSGDYETVMKGIEHGACDYLVKPPSLKEIQN 56 889********6654.8****************************98888765 PP

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence
MDEMNGFELL KTIGLEMDIP VIMMSTSGDY ETVMKGIEHG ACDYLVKPPS LKEIQNIWQH 60 VVRLKKNKST LSAPDTEKKG TERNLRRKNN NQTKNNEDED SSHSSDELLP NQKKTRISWA 120 DPELHAKFVE AFYKLGDKAV PSKILVEMNV QGLTREKVAS HLQKYRKILE KQSKKPNSIT 180 TFNGMSGRLR NSTFPSLLNL QFQNGRNYLS SSQSYHRGTS QLSHYGVTPN ASNRSSVNPH 240 PHFLPSTQPY TSQYSSTLGT INQNPQKIQV SDSTMHNLHN QTYASGLNAQ TFSSSSKLFD 300 PHMVSSSKFP DYNANIHSGT SNFQFGEASN VLANNNLFDD LTYYPMLDHA SSSNLNTVFQ 360 SDYTFNMTHS TLSGYDDGMR NMIAPTIPST NVMESQSVDQ IPSLENPLAF LETDSDHLGS 420 YSSADDDLSA AIRPYQQQ

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence

MDEMNGFELL KTIGLEMDIP VIMMSTSGDY ETVMKGIEHG ACDYLVKPPS LKEIQNIWQH  60
VVRLKKNKST LSAPDTEKKG TERNLRRKNN NQTKNNEDED SSHSSDELLP NQKKTRISWA  120
DPELHAKFVE AFYKLGDKAV PSKILVEMNV QGLTREKVAS HLQKYRKILE KQSKKPNSIT  180
TFNGMSGRLR NSTFPSLLNL QFQNGRNYLS SSQSYHRGTS QLSHYGVTPN ASNRSSVNPH  240
PHFLPSTQPY TSQYSSTLGT INQNPQKIQV SDSTMHNLHN QTYASGLNAQ TFSSSSKLFD  300
PHMVSSSKFP DYNANIHSGT SNFQFGEASN VLANNNLFDD LTYYPMLDHA SSSNLNTVFQ  360
SDYTFNMTHS TLSGYDDGMR NMIAPTIPST NVMESQSVDQ IPSLENPLAF LETDSDHLGS  420
YSSADDDLSA AIRPYQQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58080.1	7e-41	ARR-B family protein