PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026395830.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 198aa    MW: 22522.8 Da    PI: 7.8254
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026395830.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR123.32.1e-07921651788
            FAR1  17 skskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     + +k++++  +  +  f C k gk ++ k++   +k r+++ ++r++C  kl+ +  + +kw++   + +HnH+
  XP_026395830.1  92 TVNKNENQGVKGLSIVFGCEKGGKYKKGKQTssPSKCRKRTGTKRCKCPFKLRSTCITASKWNLVLKVGHHNHP 165
                     4444444555668899********9999988444555667777788888888888888***************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MEHPTRCCLA ENTSIEEDLE VTEEIILDEE KADKTVLDIA NQHNVEQLEP IDVVAFDSTD  60
YFTINKTFDS RKEVIEGVFG IQKNIVVVIV KTVNKNENQG VKGLSIVFGC EKGGKYKKGK  120
QTSSPSKCRK RTGTKRCKCP FKLRSTCITA SKWNLVLKVG HHNHPHPDEL LGHAFVGRLT  180
KNEEKYVIYF HEHDMPPR