PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396411.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 321aa    MW: 37324.1 Da    PI: 8.3677
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396411.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF32.51.1e-101251443
                    -SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
          SRF-TF  4 enksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                      +  r+ t+ kR++g+lKK  E   LC+++ ++i+++++
  XP_026396411.1 12 AKEKSRNSTYFKRKKGLLKKLDEFNKLCGVDTLMIVYGPK 51
                    55677889******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGRAKLKMEL IAKEKSRNST YFKRKKGLLK KLDEFNKLCG VDTLMIVYGP KHGDRPVEVE  60
TFPPELDKVD EIIKRYQQVP EEDKVKRTLT IKNFFEDQKR KSEAELVNLR KKNQELPLDD  120
LVTVEQLQQL YHSLDAKKEL VEQRINSMKP MNSSGVTKDS GSKRIAEFPN SVVPDQIPYQ  180
ASNTYNNNYD HDTLWRSEDI NMHSQPFGYP SPMEYHHLNT TKDENLSTPM FVKPVIGSSY  240
GYVSMGNQFY YPNQHMGSPM MSTASMYHSL GQIPPFQMQQ QQFQFMNTPQ THHQQQFMSS  300
GFSSQQSPSW QFGFQDHQTN N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11326KEKSRNSTYFKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.13e-19M-type_MADS family protein