PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396437.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 579aa    MW: 65760 Da    PI: 9.8499
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396437.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.51e-1232122197
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk++ +s+  + +rl lpk+f++++g++  es +  + +  +  W + +  rk +g +++++GW eF +   +++g  +vF++dg+s+f   v+
  XP_026396437.1  32 FFKIF-HSSIIRDKRLELPKEFTRKFGKELSES-DHAILQIPNGIWHIGI--RKAKGLVMFENGWPEFMEFYSICVGHLMVFRYDGNSKF--QVH 120
                     78888.99999***************7665566.55555556669*****..**********************************9999..888 PP

                     EE CS
              B3  96 vf 97 
                     +f
  XP_026396437.1 121 IF 122
                     77 PP
2B361.71.2e-19251346199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ ++s++lk+g l +p+ f +++ ++ ++ + +tl+ + gr+We ++  r k++r  l+ G  +Fv++n+L++gD++vF+l++r + + +v+
  XP_026396437.1 251 FFKAIMRSSYLKRGTLGVPNAFGTSYLKN-RTRFAVTLMVSYGRTWEARYFSRVKGRR-SLS-GLGKFVSDNHLRDGDVCVFELVDRVKVKINVH 342
                     99************************544.56789***************66666666.455.**********************999999**** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr 
  XP_026396437.1 343 IFRV 346
                     *996 PP
3B363.43.7e-20435531199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f kvl+++++ + g +++p  fa+++ ++ ++++ +tl  ++gr+Wev +  r + +r  l++GW +Fv++n+LkegD +vF+l++r + e++v+
  XP_026396437.1 435 FYKVLMRPSYVRGGYVRVPMVFAKRYLKI-TTQMAVTLGVSDGRTWEVLYLARAQHDR-RLSQGWPKFVSDNHLKEGDLCVFELVDRINIEMKVH 527
                     7899**********************655.4679****************76555555.6999***********************99999**** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +fr 
  XP_026396437.1 528 IFRV 531
                     **96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    
MAVEISTASF VKVQSQKQDF KRSKYHLSTM HFFKIFHSSI IRDKRLELPK EFTRKFGKEL  60
SESDHAILQI PNGIWHIGIR KAKGLVMFEN GWPEFMEFYS ICVGHLMVFR YDGNSKFQVH  120
IFGMNATEIK YPSHFENTDR EVEVISTHSD DIELISAHPA AVDIISVHSD SSTQSNGEPS  180
LSTLGVFASN EDNHNQMVES AMCELPQPSQ LQRAFSSKSR PKRSCTAAFQ ASQLQESALK  240
ASAKFTSDNP FFKAIMRSSY LKRGTLGVPN AFGTSYLKNR TRFAVTLMVS YGRTWEARYF  300
SRVKGRRSLS GLGKFVSDNH LRDGDVCVFE LVDRVKVKIN VHIFRVSQEI ITIHSGSRTI  360
CEPSMSTLVE FASSEGRLNL EAEPATHEFP QASRKRKAFS SKLTHKRSYT TTLQAIRLQE  420
SALEAAEKFT SDNPFYKVLM RPSYVRGGYV RVPMVFAKRY LKITTQMAVT LGVSDGRTWE  480
VLYLARAQHD RRLSQGWPKF VSDNHLKEGD LCVFELVDRI NIEMKVHIFR VSQEIISIHS  540
SSGTQTKYEP PMSTLVEFAS SEGRVNQKAE PGKTLITEF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.11e-43B3 family protein