PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396439.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 476aa    MW: 53717.9 Da    PI: 9.3839
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396439.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B365.86.3e-21129225198
                     EEEE-..-HHHHT.T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
              B3   1 ffkvltpsdvlks.grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                     ffk+ ++++  k+ g++ +p +fa  + +    +++ +tl+ ++g+sW+v + y+++  +++l+kGW +F+ +n+L++gD++vF+l++r++fe +
  XP_026396439.1 129 FFKAIMHASCVKTgGNMHVPSDFAIPYlQ-H--KTTRVTLRVSDGKSWDVGVLYTQSFYKTTLSKGWPKFALDNHLNTGDVCVFELVDRKKFEIN 220
                     5666666555554499********99944.3..34579****************999999*********************************** PP

                     EEEE- CS
              B3  94 vkvfr 98 
                     v++f+
  XP_026396439.1 221 VHIFQ 225
                     ***96 PP
2B362.66.5e-20296390198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffk+ + + + ++g + +p +fa+ + +   ++  +tl  ++g+ W+v l  + +sg+++l++GWk+Fv++n+L++gD++vF+l++r+ f ++v+
  XP_026396439.1 296 FFKAIMCPFNISNGVVNIPGNFATPYLKH--KTALVTLSVSDGKLWDVIL-TSINSGTTTLSNGWKQFVSDNQLNQGDVCVFELVDRKYFVMNVH 387
                     788899999999***********999544..4557999999*********.58888999************************************ PP

                     EE- CS
              B3  96 vfr 98 
                     +fr
  XP_026396439.1 388 IFR 390
                     *98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    
MEFYSISAGH LLVFRYDGNS TFHVLIFTMS ATEIEYPMRS FKTMFKGKAQ VIDIDSCSSD  60
SNNENSTQSE PSSSRDSQVN LETEPVDEHD YPKRRKVSAA TKRFNTSRVT QLKERALRAA  120
EAFRSEEPFF KAIMHASCVK TGGNMHVPSD FAIPYLQHKT TRVTLRVSDG KSWDVGVLYT  180
QSFYKTTLSK GWPKFALDNH LNTGDVCVFE LVDRKKFEIN VHIFQVFKTN FRDEAQVIRI  240
DPCSTRSNNE TSTQSSSTRG GQVNLETEEP VFCSNVTQSK ERALAAAEAF TSDNPFFKAI  300
MCPFNISNGV VNIPGNFATP YLKHKTALVT LSVSDGKLWD VILTSINSGT TTLSNGWKQF  360
VSDNQLNQGD VCVFELVDRK YFVMNVHIFR VFQKTCSSSE KLEIDAPRAG RSKEKSLAAA  420
NAFKSKKPYF KMVPAAFSVP YLKHETKVRL RGVDGKTWEM QCNLLHKPDR AKLFKG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-26B3 family protein