PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396440.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 430aa    MW: 49356.5 Da    PI: 10.1215
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396440.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B344.92.2e-1429118298
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     fk+   +++ + +rl +pk+f++++g+  e s   t+e +sg +W v l  +k++g++ +++G keF +   + +g f+vF+++g+s+f  +v +
  XP_026396440.1  29 FKII-LNHTIEYKRLEIPKEFLKKFGK--ELSDCATIEVPSGSVWPVGL--TKRRGAISFEEGLKEFMEFYSISVGYFLVFRYEGDSTF--HVLI 116
                     5555.356777889***********84..47888***************..**********************************9999..9998 PP

                     E- CS
              B3  97 fr 98 
                     f+
  XP_026396440.1 117 FN 118
                     85 PP
2B358.31.4e-18221316299
                     EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
              B3   2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                     f + +p++  k++ + +p  f   + ++  +++ + l+    +sW+vkli+ kk +r +l++GW +F ++n+Lk gD++vF+l+++++  ++v++
  XP_026396440.1 221 FIAVLPASCVKTRHVNVPAAFKHPCLHQ--KTTFINLRVAGRKSWDVKLIFLKKHQRSYLSEGWMKFISDNQLKPGDVCVFELVDSKKILMNVHI 313
                     4445566666666688888885444444..44569999999**********99999999*************************99888899999 PP

                     E-S CS
              B3  97 frk 99 
                     fr 
  XP_026396440.1 314 FRD 316
                     985 PP
3B344.13.7e-143584221984
                     -HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
              B3  19 pkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                     p  fa  +  k   +++++l +  g++We++++   +  + r  l kGW +Fv +n+LkegD++vF+l
  XP_026396440.1 358 PAAFAVPYL-K--HEIKVRLSSMGGKTWEMQCNLlhESDRHRAKLFKGWDKFVLDNHLKEGDICVFEL 422
                     666665552.3..3468***************885444444477889********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 430 aa     Download sequence    
MSSKYDQSSK KRKKMESSSS TSSSPLHFFK IILNHTIEYK RLEIPKEFLK KFGKELSDCA  60
TIEVPSGSVW PVGLTKRRGA ISFEEGLKEF MEFYSISVGY FLVFRYEGDS TFHVLIFNIS  120
ATEIEYPMHN FRNNFKDKAQ VIDIDSCNSD SNNETRSQTE SLSSRGGHVN LKTEPADDHA  180
FPKQRKVFAN TLTTRRSTTS RVTQSKALAA AREFKSEKPF FIAVLPASCV KTRHVNVPAA  240
FKHPCLHQKT TFINLRVAGR KSWDVKLIFL KKHQRSYLSE GWMKFISDNQ LKPGDVCVFE  300
LVDSKKILMN VHIFRDSQET SSSQKLKTNA PQEARSKENS LVSAEAFKSR KPYFKNVPAA  360
FAVPYLKHEI KVRLSSMGGK TWEMQCNLLH ESDRHRAKLF KGWDKFVLDN HLKEGDICVF  420
ELYDIEKASR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11014KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-42B3 family protein