PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396481.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 215aa    MW: 23877.3 Da    PI: 9.8563
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396481.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.51.5e-221564150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    kri n+  rqvtfskR+ gi+KKA+EL +LC+a vavi+ s+ g+ y y+
  XP_026396481.1 15 KRIGNENTRQVTFSKRKGGIFKKAHELGTLCGAHVAVIVNSPAGQPYSYI 64
                    79*******************************************99997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
MARKPSMGKQ KIEIKRIGNE NTRQVTFSKR KGGIFKKAHE LGTLCGAHVA VIVNSPAGQP  60
YSYINSETVI DRYLSGDTRI PNPPVMPHRE ARILELNKEY SEALDRLEAE KKRGATLRKM  120
AEENKSKYWW DPIDDLGVKE LEILCGAIDA LKLKVAKRAD ELQLNLTSFL PGNNYRMGST  180
SSSTIIQNYQ IPNPSLPYHG YAAGFGLNGT GSNGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.12e-34M-type_MADS family protein