PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396495.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 203aa    MW: 22566.5 Da    PI: 7.4193
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396495.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF57.71.5e-181862145
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    krie +  rq+tf+kR++gi+KKA  L +LC+ae av++fs++g 
  XP_026396495.1 18 KRIEKEVARQTTFTKRKEGIFKKACQLNTLCAAETAVVLFSPSGA 62
                    79****************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MDKPKAKKTH GRKKIELKRI EKEVARQTTF TKRKEGIFKK ACQLNTLCAA ETAVVLFSPS  60
GAPFSFGEPS VQSVVDRFLA DGRSLREESL IKEELDARND KIDTQYNTSL KRQEDAQVRG  120
KELAEAKKAD GDLFGWDVPI KEMNLEQLES LKFELGNLQI IEEPVDATAA SSSANPLFLS  180
RGSSSSNVSI NPPPPNDPQG YHF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1314KPKAKKTHGRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.15e-27M-type_MADS family protein