PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396765.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 284aa    MW: 31267.5 Da    PI: 9.8383
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396765.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.26.9e-161150342
                    --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
          SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                    i n++ r  tf kRr+g++KK +ELS+LC++ ++ i+ ++
  XP_026396765.1 11 ITNDTARRATFKKRRKGLMKKVSELSTLCGVSACAIVNGP 50
                    89***********************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MARKKVKLAY ITNDTARRAT FKKRRKGLMK KVSELSTLCG VSACAIVNGP YDRQPEIWPE  60
QSEAHRVLMR FKSLPEMDQN KKQLNQESFT YNRIGKISEQ FKKQQRENRY MEITGLYNLA  120
IAGKCSISDV LPTDLGDLAY VLEEKKKEVQ RRLSALKKAS TPVEQTSPAN ASSTTAIPNA  180
STNIMNPNVN VGGAYGSGVN GGTVPGGGLY GGVVNHHNQG GGDKINGTGG QEFMTLDQMR  240
ASMEALQSQP WYMDVMKPPS IPQPDDQMAN YLNLVGGDQY NKNG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAYITNDTARRATFKKRR
22226KKRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.12e-44M-type_MADS family protein