PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396814.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 264aa    MW: 30481.9 Da    PI: 7.0616
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396814.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B359.65.6e-1922111198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ff+v+ ++d ++++ l lp  f+++ +  +  +k++tl+d++ + W+vk+   k+++ y++++GW +Fv+   L+ g f++F ++g+s+f  +v+
  XP_026396814.1  22 FFQVF-TPDKSSHH-LKLPAAFINRLD--EDLPKKVTLRDSTDKLWSVKV--VKSGNDYFFQNGWGDFVNHYTLQYGNFLMFNYHGNSRF--HVS 108
                     66666.66777777.********7665..55999****************..**********************************9999..999 PP

                     EE- CS
              B3  96 vfr 98 
                     vf+
  XP_026396814.1 109 VFD 111
                     997 PP
2B339.31.2e-121892453389
                     -SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3  33 sktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                      +++t++ +sg++W v++  + +++ryv++kGW +F  +n++k gD +++++++ ++
  XP_026396814.1 189 VTDMTIRVQSGKKWPVEVYCEEYGKRYVIRKGWHDFRTENNMKHGDKCILEFKKGRG 245
                     4578999999********77*******************************885533 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MGKYGKDIAS SSSVIGQKNH HFFQVFTPDK SSHHLKLPAA FINRLDEDLP KKVTLRDSTD  60
KLWSVKVVKS GNDYFFQNGW GDFVNHYTLQ YGNFLMFNYH GNSRFHVSVF DYSTQCERED  120
TTIDYVIGNE NPSLGEDACE LEVPESLRQS LGDSSENNSE KYDVIANSYD NPEKPQFTAT  180
VNDKSQYAVT DMTIRVQSGK KWPVEVYCEE YGKRYVIRKG WHDFRTENNM KHGDKCILEF  240
KKGRGGRRTS DVIHAYPLNV KLER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-21B3 family protein