PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396816.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 214aa    MW: 24066.8 Da    PI: 9.6742
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.14.4e-151212101199
                     HHTT-E..E--HHH.HTT---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
              B3  11 lksgrl..vlpkkfaeehggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                     l++g++   lp +fa+ +  k  +s+ +tl+ ++gr W+vk++     + ++++l+ GW +Fv  n+Lkeg ++vF+l++ ++ e++v++fr 
  XP_026396816.1 121 LRKGCVgpPLPAQFAKPFLTK--QSQIVTLRVSDGRMWDVKCTTssFPHYQAHLLK-GWYDFVLGNHLKEGGVCVFELVDMDNLEMNVTIFRV 210
                     444444446999***877533..6789***************55455666667777.*********************988**********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MGKGWNNFSI GNRLSEGDAC VFEFHNYTKG NTLNVRITKK SDFEKHGYSL IKTKRRIKYL  60
GPEVKLLPGS KIDCLTAPAE NRAIQSTDAF KSKYPTCNLT KAIQAANAYP SCEVIMRPSY  120
LRKGCVGPPL PAQFAKPFLT KQSQIVTLRV SDGRMWDVKC TTSSFPHYQA HLLKGWYDFV  180
LGNHLKEGGV CVFELVDMDN LEMNVTIFRV NSTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49480.14e-21B3 family protein