PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396817.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 329aa    MW: 38062.4 Da    PI: 9.2468
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396817.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B364.61.5e-2019109198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 
                     ffkvl +   ++++ l +p  f+++++gk+  + +l+l++++grsW++k+  +k++++  ++ +GW eFv+a+ L+  DfvvFk++g+s+f  +v
  XP_026396817.1  19 FFKVL-QIGRFEEK-LLVPPAFIRHFNGKT--PDKLILQSPTGRSWTIKM--KKYGNKeLFFYNGWPEFVHAHSLQHEDFVVFKYKGHSKF--HV 105
                     67777.66777776.888*****9998885..558***************..7777777999************************99999..88 PP

                     EEE- CS
              B3  95 kvfr 98 
                     k++ 
  XP_026396817.1 106 KIHA 109
                     8875 PP
2B361.31.7e-191732591099
                     HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEEE-S CS
              B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkvfrk 99 
                     + ks+ l++p++fa+e+g+++e+s  ++l+d++ rsW v l ++  +gr+ +++GW +F + n+L +gD+++F++++r +  el+v +f k
  XP_026396817.1 173 TRKSH-LTIPRNFAKEFGLDEENS--IVLQDPKERSWPVDL-IQVADGRINMADGWAQFSEGNKLSAGDVCLFQVINRtKVDELNVIIFPK 259
                     45555.**************8775..***************.599999999***********************99888999999999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MRRKLRSNAS TNISNKTSFF KVLQIGRFEE KLLVPPAFIR HFNGKTPDKL ILQSPTGRSW  60
TIKMKKYGNK ELFFYNGWPE FVHAHSLQHE DFVVFKYKGH SKFHVKIHAK TGCEKEFPLE  120
FTEPILEVKQ EEDEETDEET TYGNGYNEQR RVVKSAMPRM SEHPHFVAVW RDTRKSHLTI  180
PRNFAKEFGL DEENSIVLQD PKERSWPVDL IQVADGRINM ADGWAQFSEG NKLSAGDVCL  240
FQVINRTKVD ELNVIIFPKA EVEKQGWEVP NLPITRRPIY YLDPEFKTRN LGKRPMTACM  300
TIPAKGRVAA DSPESSGSES KCPYTHFKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31640.14e-24B3 family protein