PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026396853.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family bHLH
Protein Properties Length: 224aa    MW: 25048.8 Da    PI: 5.364
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026396853.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.52.4e-08242853
                    HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHH CS
             HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIks 53
                     Er+RR+r+N+ +++Lr l+P       +K++K ++L  A  Y+++
  XP_026396853.1  2 SERNRRKRLNNQLFTLRGLVPCI-----TKMDKRSVLVDALAYLQD 42
                    6*********************7.....6**************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MSERNRRKRL NNQLFTLRGL VPCITKMDKR SVLVDALAYL QDILNQTQKE IEAGVTEDPG  60
HAIIDSAAMS PDSLTENVEI DHPPCHHLGV VLEKSVINAD VEGQPQPIMS TALEPKTTPY  120
SAVFPAITKM EAEKVDEEIY MLKIVYNKAL GAMSQVQRSV EMLKGFDFIN VSVSEYDQHH  180
MQSSSFLRVK KIKGSLLVTD EENLIERVKV MAKQLGLNLP SADD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29930.42e-13bHLH family protein