PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026396996.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

NAC

Protein Properties

Length: 446aa MW: 50054 Da PI: 7.2965

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026396996.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	168.8	1.8e-52	42	172	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeel+ +yL+kkv+ + ++l +vi++vd++++ePwdL+ k ++ + ++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk++ XP_026396996.1 42 VPPGFRFHPTDEELLYYYLRKKVAYQVIDL-DVIRDVDLNRLEPWDLKdKcRIGSgPQNEWYFFSHKDKKYPTGTRTNRATNAGFWKATGRDKAI 135 69**************************.9***********943444443456******************************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +++ +g++ktLvfy+grap+g+ktdW+mheyrl XP_026396996.1 136 HHLnNSKPIGMRKTLVFYTGRAPHGQKTDWIMHEYRL 172 99768888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MIHDQAAGGG SNGGQGQSAT AGGGRGLQHH HEHQQPAAMA VVPPGFRFHP TDEELLYYYL 60 RKKVAYQVID LDVIRDVDLN RLEPWDLKDK CRIGSGPQNE WYFFSHKDKK YPTGTRTNRA 120 TNAGFWKATG RDKAIHHLNN SKPIGMRKTL VFYTGRAPHG QKTDWIMHEY RLIDDNHNSS 180 ASSSLNDKDD HYDHGHHQVQ QEEGWVVCRV FKKKTHQRGF QSELGADADD DHQQAHSHYK 240 NHMININGPP TAGVGGTPVH SYHQYQMMSA EPKSNNHNFH HPYQDFSTTT LLDGSMNLPQ 300 LLSQESSSAV SVPPTTFLHQ PAVSLNNLDI ECSQNLMKLT AQSGIVAGAT VTTGLTNTIP 360 NHHHHHHTRQ QEEDHGNNNG GRYTGNSNSD WSFLDKLLSS SSSSTNHYHH SVDQLNLSQT 420 ANSFQMKFPF HQYLGVGETD VIKFSK

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MIHDQAAGGG SNGGQGQSAT AGGGRGLQHH HEHQQPAAMA VVPPGFRFHP TDEELLYYYL  60
RKKVAYQVID LDVIRDVDLN RLEPWDLKDK CRIGSGPQNE WYFFSHKDKK YPTGTRTNRA  120
TNAGFWKATG RDKAIHHLNN SKPIGMRKTL VFYTGRAPHG QKTDWIMHEY RLIDDNHNSS  180
ASSSLNDKDD HYDHGHHQVQ QEEGWVVCRV FKKKTHQRGF QSELGADADD DHQQAHSHYK  240
NHMININGPP TAGVGGTPVH SYHQYQMMSA EPKSNNHNFH HPYQDFSTTT LLDGSMNLPQ  300
LLSQESSSAV SVPPTTFLHQ PAVSLNNLDI ECSQNLMKLT AQSGIVAGAT VTTGLTNTIP  360
NHHHHHHTRQ QEEDHGNNNG GRYTGNSNSD WSFLDKLLSS SSSSTNHYHH SVDQLNLSQT  420
ANSFQMKFPF HQYLGVGETD VIKFSK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	212	216	KKKTH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G79580.1	4e-88	NAC family protein