PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397266.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family LBD
Protein Properties Length: 228aa    MW: 25037.4 Da    PI: 8.1024
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397266.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.91.9e-39121131101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkCa+dCv+apyf++eq p++fa++hk+FGasnv+kll ++p  +r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+++l+a+l
  XP_026397266.1  12 PCGACKFLRRKCASDCVFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHVPVPDRCEAVVTIAYEAQARVRDPVYGCVAHIFALQQQVACLQAQL 106
                     7*************************99******************************************************************* PP

          DUF260  95 allkeel 101
                      ++k++l
  XP_026397266.1 107 MQVKSQL 113
                     *999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MATGNGGGSG SPCGACKFLR RKCASDCVFA PYFCSEQGPA RFAAIHKVFG ASNVSKLLLH  60
VPVPDRCEAV VTIAYEAQAR VRDPVYGCVA HIFALQQQVA CLQAQLMQVK SQLVNKVAAD  120
TRSLENHNWM ENVAAAVTSQ HMSYPATYMR STVSPQSSLE SVDNNNCSNN MDISSIQGMH  180
YTSSGRDNGY NMNEHLHSYQ SCNKKRMISN NELGELQALA LRMMRNDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.19e-64LBD family protein