PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397354.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 245aa    MW: 27755.1 Da    PI: 4.3118
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397354.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.51e-121592203798
                     EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE..EEEEE- CS
              B3  37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefelvvkvfr 98 
                     ++ + ++++W++k+  +++++   +   Wk Fv++n+Lk+gD +vF+l+ +  ++ +++v++++
  XP_026397354.1 159 VILSYQNKTWRMKY--CGNRSVKRFDPSWKYFVQDNNLKVGDGCVFELTaHGnECIKFRVQILD 220
                     4467799*******..7777667799*********************87533488888888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MEPSSSNCIS VDEQSGFLQK ESSPPSQQKV DESMDKPQVN VAGPIQLDTQ MELEHSGSSQ  60
ILLGLPSPHK IGETIQISHI NDSEAQLNPI QREAENGMDA TEEEQYKMKL DDTTTDEQDE  120
PYFLTDKPYF HCILAKTQLY NMGIPKSVSQ LLPEEEVPVI LSYQNKTWRM KYCGNRSVKR  180
FDPSWKYFVQ DNNLKVGDGC VFELTAHGNE CIKFRVQILD GDIPCEFLDR VEGETINHPI  240
VIGLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.18e-07B3 family protein