PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397414.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 209aa    MW: 23686.7 Da    PI: 7.4316
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH21.25e-07143162626
                     -SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   6 CrffartGtCkyGdrCkFaHg 26 
                     C  f++ G Ck Gd C +aHg
  XP_026397414.1 143 CTEFRK-GSCKKGDACEYAHG 162
                     999***.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MMLREAAAAN QTIPTIQIPQ DWSHHLDNPT TAQMILSHHL PVSGISSSSS TSLSEVLLTA  60
LTRYNKLNGS TDTNTTEISG GSGGCVTVDP HDYYCDEFRM YDFKVRRCTR ADQHEWVDCP  120
YVHPDEKARR RDPVRFNYSA TGCTEFRKGS CKKGDACEYA HGVFESWLHP DRYRTQACKD  180
GIDCRRKICS LLIRLISSEL YQLIGTRLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.13e-50C3H family protein