PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397458.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 397aa    MW: 45495.7 Da    PI: 9.504
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397458.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B361.31.6e-19493294
                    EEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS
              B3  2 fkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94
                    f+ l  s +   + l lpkkf++++   + ++ ++ t++l+ +sgr+W+v+l +rk++++ +l+kGW+ Fvk+++L e+D + Fk+ +  ++ + v
  XP_026397458.1  4 FTFL--SKNYH-HHLKLPKKFVKNFlmsEFSEIGGSTVSLKGPSGRTWTVEL-MRKGDSTLYLKKGWEVFVKEHNLGENDALFFKYRS--GGIFDV 93
                    5555..44444.4599******87799955556778****************.7888888*************************854..443344 PP
2B336.96.4e-12292371184
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                     f+    ps+v+  +++v+p k a+++  +    +s  ++l+  +g++W+ +++y ++  ++  + GWk+Fv  n+L++g  + F+ 
  XP_026397458.1 292 FVVLIQPSHVSGICCMVIPIKSARKYlpN----GSDNISLKM-NGKTWQPQFTYYGRIAGF-RGPGWKKFVLKNKLEVGNACSFEK 371
                     5566779999999*************542....444677655.89*******887776665.577*******************92 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
MNFFTFLSKN YHHHLKLPKK FVKNFLMSEF SEIGGSTVSL KGPSGRTWTV ELMRKGDSTL  60
YLKKGWEVFV KEHNLGENDA LFFKYRSGGI FDVLMFDDGD FCKKESSYFV RNCQGCHMST  120
NVRLNERRRV ESEPRLYYEG ENEPRRFKGE NKPRRHKEGE NEPTRSEEVE SEPSIEIIEP  180
KRLRYTDKPI TISDEEQEEE DADRETPRFL GRVPVCFGRR LPKSVPGCQS KALVRTTEVS  240
VTGENSEDEE TEVNQVSPLA IALHKRTVHA KEIHLPYKQS IREGKHRGTP HFVVLIQPSH  300
VSGICCMVIP IKSARKYLPN GSDNISLKMN GKTWQPQFTY YGRIAGFRGP GWKKFVLKNK  360
LEVGNACSFE KTTSSALSSR TPSNSITLSV SIFRNVV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33280.15e-18B3 family protein