PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397471.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YA
Protein Properties Length: 329aa    MW: 36168.7 Da    PI: 8.1279
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397471.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.71.4e-31172227258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                      p++VNaKQy++Il+RRq+Rakle++++l  k rkpylheSRh hA++R RgsgGrF
  XP_026397471.1 172 GPIFVNAKQYHAILRRRQTRAKLEAQNRL-VKPRKPYLHESRHLHAVKRVRGSGGRF 227
                     59***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MQNIQGNDSH QFSSHPASPS VVNSCSRSWW NSSVSQIPPS SMSRSTSLNV DTPPQHCQNA  60
NQLGSQQKDQ DSSSSQSTIQ SHHEMATIGH AENNGRQEEA QAKSFATQAT PYFSLPPSQI  120
DFNQSTTHLP YPYADPYYGA MVAAYGAQPV MLPDMVGNPT RVPLPVEVAE AGPIFVNAKQ  180
YHAILRRRQT RAKLEAQNRL VKPRKPYLHE SRHLHAVKRV RGSGGRFLKQ QTDASSPPNV  240
ENTSELASQQ TRGNLLESEI RQSEPANPVA PTTLYSDTTC VSYSEAPDHR LFSGYNHLQR  300
LGSTSSQDSG SGDGMSYNGY QQFGIPVTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.14e-41NF-YA family protein