PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026397577.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family NF-YC
Protein Properties Length: 239aa    MW: 27725.2 Da    PI: 4.2581
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026397577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC31.24.6e-101432241899
           NF-YC  18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprd 99 
                       ++P  rik i+k +    +i+ ea  l+ ka e f+ ++   +  +  + +++++    ++++vt+t+ +dfl d  p++
  XP_026397577.1 143 ACRFPANRIKTIIKNEGFDFRITQEAVFLINKATEQFLEQFMEDARANVIKDRKKAVAYKHVSSVVTKTKRYDFLSDFAPEK 224
                     5679***********999999****************999999999999999999**********************99975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MKRSSSSSRK EEETTMKRNP IPKLPIKEPE IQMEASSSSA SEEPMEEEEE QSQSQSQEEE  60
EQGEEEEEQV EEKEDGQEEE EEEEEEEEEA KSSNNSNENM NEESMEDEEE EEQKPEEEVK  120
KIKKKGSSKK IKDTMKRDVV SSACRFPANR IKTIIKNEGF DFRITQEAVF LINKATEQFL  180
EQFMEDARAN VIKDRKKAVA YKHVSSVVTK TKRYDFLSDF APEKIKAEDA SSERKLAET
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.15e-26NF-YC family protein