PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026397631.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

HD-ZIP

Protein Properties

Length: 243aa MW: 28049.3 Da PI: 7.1796

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026397631.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	50.3	4.2e-16	80	130	6	56
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ +q+e Le+ F+++ ++ e++ +LA++lgL+ r+V vWFqNr a++k XP_026397631.1 80 RMRWDQIESLERSFQEEIKLEPERKIKLAQELGLQPRKVAVWFQNRHARWK 130 56679*********************************************9 PP
2	HD-ZIP_I/II	106.9	1.5e-34	76	167	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 e+krr+ +q+++LE+sF+ee kLeperK +la+eLglqpr+vavWFqnr AR+k+kqlE+ y++Lk+++d +++e+ +L++ev +L+ +l+ XP_026397631.1 76 ERKRRMRWDQIESLERSFQEEIKLEPERKIKLAQELGLQPRKVAVWFQNRHARWKAKQLERLYDSLKQEFDIVSREKLKLQEEVMKLKMKLD 167 69**************************************************************************************9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MAWNETVKPL MAGGVGGKHT VAFLYDYNYH PFPGGHHQAG EVERTHLSNN NNHNSNSNSN 60 SSNNNSAHDE NNNHAERKRR MRWDQIESLE RSFQEEIKLE PERKIKLAQE LGLQPRKVAV 120 WFQNRHARWK AKQLERLYDS LKQEFDIVSR EKLKLQEEVM KLKMKLDHQA QMIQGSRGST 180 DVLMEPEETV ESKSVVISNS STMLQGATYH QTAGDCNYTF NLDDYIQGSL PYMGILHGYP 240 NTY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	106	RKRRMRWDQIESLERSFQEEIKLEPERKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03790.1	6e-42	HD-ZIP family protein