PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398048.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family C3H
Protein Properties Length: 204aa    MW: 22787.8 Da    PI: 9.731
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398048.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.61.7e-12127150124
                     --S---SGGGGTS--TTTTT-SS- CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFa 24 
                     yktelC+ + +tG C+yGd+C+Fa
  XP_026398048.1 127 YKTELCNKWVQTGVCRYGDQCQFA 150
                     9**********************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    
MNAGTNTTAP PFNRITGRHR AAAVTSPTRV IGNINQGFEE NSVQFQPERA SLPKSISIRS  60
SSYFKMNAGR NTTAPSSNRI TTDGLRAAAT PFFPRTSLRV HMPTLSAVDE KKDPVPVELD  120
AYVQGMYKTE LCNKWVQTGV CRYGDQCQFA DGFGELRPVV RHPRYKTEVC REILNGGFCP  180
YDHRCHFRRV LTDQEKRAAG ITCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66810.14e-41C3H family protein