PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398363.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family M-type_MADS
Protein Properties Length: 145aa    MW: 16458.9 Da    PI: 8.2145
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF22.21.9e-0728571847
                    HHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF 18 ngilKKAeELSvLCdaevaviifsstgkly 47
                    +g  K  +EL++LC+++ +vi+ ++ g l+
  XP_026398363.1 28 KGFVKLVSELCTLCGVDGCVIVCGPYGDLK 57
                    57778889*******************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MVENDGEIGS GASSKTYREI HRDVMESKGF VKLVSELCTL CGVDGCVIVC GPYGDLKPEI  60
WPTDQPEMQH VLMKFNSMSL EERNKKTTNH RSFLNKQITK LDEKSRKQEF KNRNEVLGRI  120
VREALNGKCS PVNRSDLADL RMLIA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05860.23e-16M-type_MADS family protein