PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398456.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Protein Properties

Length: 420aa MW: 48243.8 Da PI: 9.5251

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398456.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	50	5.5e-16	318	412	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 ff v +++++ +s+ l +p +fa++h + + k +++ ++++++W++ + +r+++ + l++GW++ + g+ gD++vF+l +++++e++ XP_026398456.1 318 FFAVYIRESYITSAYLHIPSSFAKKHlpE----NIKNVMVGNSDNKVWTIGYPFRGYRTH--LAAGWSSLRRNLGISIGDVFVFELLKEKDAEMR 406 78899999****************532....3358***********99999855..99*******************99** PP EEEE-S CS B3 94 vkvfrk 99 v+vfr+ XP_026398456.1 407 VSVFRE 412 **96 PP

Sequence ? help Back to Top
Protein Sequence Length: 420 aa Download sequence
MIPYDSILRS PSGCWNVKVR EEEDGGLSFR NGWPDFVEAH YLSHGDTATM KYVSNSQFDV 60 KLYGTNGCEK HKYRASDFGR DSFCQDKRNR GLFNRDALKR KANVIEGRSK VHHPECFCEG 120 KPYFFASWTE NKKYQLEIPE KVVRKLENTL SDIVALKRTN GRLRSVELKR SEGKVWFYKD 180 DSETQGESSL KKRCRLIQRE EDDNVTSLDT PLCRTHVESK TNEERAMLSV PPGFDISVQL 240 NKNKGKKSLV SHVTRLPCLG NEITISGDCL PVVKQEEIED TSDAPASKLF RKSSWRTKGK 300 QMVAEVTKSF QSQTKYPFFA VYIRESYITS AYLHIPSSFA KKHLPENIKN VMVGNSDNKV 360 WTIGYPFRGY RTHLAAGWSS LRRNLGISIG DVFVFELLKE KDAEMRVSVF REIDNVITRL

Sequence ? help Back to Top

Protein Sequence Length: 420 aa Download sequence

MIPYDSILRS PSGCWNVKVR EEEDGGLSFR NGWPDFVEAH YLSHGDTATM KYVSNSQFDV  60
KLYGTNGCEK HKYRASDFGR DSFCQDKRNR GLFNRDALKR KANVIEGRSK VHHPECFCEG  120
KPYFFASWTE NKKYQLEIPE KVVRKLENTL SDIVALKRTN GRLRSVELKR SEGKVWFYKD  180
DSETQGESSL KKRCRLIQRE EDDNVTSLDT PLCRTHVESK TNEERAMLSV PPGFDISVQL  240
NKNKGKKSLV SHVTRLPCLG NEITISGDCL PVVKQEEIED TSDAPASKLF RKSSWRTKGK  300
QMVAEVTKSF QSQTKYPFFA VYIRESYITS AYLHIPSSFA KKHLPENIKN VMVGNSDNKV  360
WTIGYPFRGY RTHLAAGWSS LRRNLGISIG DVFVFELLKE KDAEMRVSVF REIDNVITRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-14	B3 family protein