PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026398517.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

MYB_related

Protein Properties

Length: 841aa MW: 90702 Da PI: 7.8949

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026398517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.6	2.9e-08	690	738	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v+++G g+W+ I + Rt ++k++w+++l XP_026398517.1 690 AWTLSEVTQLVEGVARFGAGRWSEIKKLSFtsySYRTSVDLKDKWRNLL 738 7*************************9999999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 841 aa Download sequence
MAVVDGNDEL GRNESSGVAL LSSKEIADPV VYKLVRVDVD GRIISATDDD VVEVDDLLEE 60 DKSELLPIVA DTRQAKECIL NEAGVLPVRN NLLGSEGISN NVEVKLQELK APLEETVPIV 120 PHGVNGNSTT QVGVEMCMKP SGFLKICGPS SLASATCSSS MLRISNNADV KVHKLKALLE 180 ESAPLVSHGV NDKCNTQLGV EMCMKPAGFL KIFGPSSLAS VTCSSSMLGV SNSAEVLPAS 240 DPSSQETVPL VSHGVNDKFA TQAGVEMCLK PTRFLKICGP SSLASVTCSS SMSGVSNSAE 300 VKVQKLKSSL EETVPLVSPG VNDKCTTHVQ GETCLKPADA LRISESSSSA SASCSSSIPD 360 FSKIKGEICL DNLSVKELHE TFRATFGRAT TVKDKLWLKR RIAMGLTNSC DVATSTFTIK 420 DKTLIRREKI EGGAPCEIKC SKSADQVDGI FKGSHKDSPI TPANKVGDEQ VSGKRLRKSD 480 AEDEYICEDP HNEHTKRVRK PTKRYIEELS KDDNSECSVK PVPSVKSSGN CQSDPKPPVK 540 PGQSVGLERP AVVTRQESFG GSGVQVPYVS RVRRGRPREN FMPLMKFHPG SMGVDAKPVT 600 KTLDECVSLP DNENDLKAKL APQQSEQPIA AEQKKEEEDD KENHNDVKTC ISVEQQVEME 660 NLDVAEDNSD HNLRTQSTTK GEPIRKHHRA WTLSEVTQLV EGVARFGAGR WSEIKKLSFT 720 SYSYRTSVDL KDKWRNLLRA SYAPPPAVRD MLNSKKQASA ALPAHILLRV RELAEKHSQG 780 PPPDLARKVG NMRGRKPGGG AGIFGRKIVG GVGKSHKVRG VGGVVSAGSK PIVNETRSGF 840 L

Sequence ? help Back to Top

Protein Sequence Length: 841 aa Download sequence

MAVVDGNDEL GRNESSGVAL LSSKEIADPV VYKLVRVDVD GRIISATDDD VVEVDDLLEE  60
DKSELLPIVA DTRQAKECIL NEAGVLPVRN NLLGSEGISN NVEVKLQELK APLEETVPIV  120
PHGVNGNSTT QVGVEMCMKP SGFLKICGPS SLASATCSSS MLRISNNADV KVHKLKALLE  180
ESAPLVSHGV NDKCNTQLGV EMCMKPAGFL KIFGPSSLAS VTCSSSMLGV SNSAEVLPAS  240
DPSSQETVPL VSHGVNDKFA TQAGVEMCLK PTRFLKICGP SSLASVTCSS SMSGVSNSAE  300
VKVQKLKSSL EETVPLVSPG VNDKCTTHVQ GETCLKPADA LRISESSSSA SASCSSSIPD  360
FSKIKGEICL DNLSVKELHE TFRATFGRAT TVKDKLWLKR RIAMGLTNSC DVATSTFTIK  420
DKTLIRREKI EGGAPCEIKC SKSADQVDGI FKGSHKDSPI TPANKVGDEQ VSGKRLRKSD  480
AEDEYICEDP HNEHTKRVRK PTKRYIEELS KDDNSECSVK PVPSVKSSGN CQSDPKPPVK  540
PGQSVGLERP AVVTRQESFG GSGVQVPYVS RVRRGRPREN FMPLMKFHPG SMGVDAKPVT  600
KTLDECVSLP DNENDLKAKL APQQSEQPIA AEQKKEEEDD KENHNDVKTC ISVEQQVEME  660
NLDVAEDNSD HNLRTQSTTK GEPIRKHHRA WTLSEVTQLV EGVARFGAGR WSEIKKLSFT  720
SYSYRTSVDL KDKWRNLLRA SYAPPPAVRD MLNSKKQASA ALPAHILLRV RELAEKHSQG  780
PPPDLARKVG NMRGRKPGGG AGIFGRKIVG GVGKSHKVRG VGGVVSAGSK PIVNETRSGF  840
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	6e-90	MYB_related family protein