PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026398686.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family B3
Protein Properties Length: 273aa    MW: 31765.3 Da    PI: 9.0486
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026398686.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.91.8e-1311103189
                     EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS....-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesg....rsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgr 87 
                     ffkvl     +++ +lv+p  fa+e    +++k+e k++ +  ++     + W+v+++ r+ +++ ++ +++W+eFv+ +++k g+f+vF+++g+
  XP_026398686.1  11 FFKVL--MQGFQQ-NLVIPPAFANEQkelMMSKHE-KEIAFLRTRKingdNLWKVEVSRRRDDDEwCFDGDNWSEFVEHHDMKYGEFLVFEHTGD 101
                     77888..445555.5********999999444444.46666666656779*******8866555559999*********************8775 PP

                     SE CS
              B3  88 se 89 
                       
  XP_026398686.1 102 LI 103
                     44 PP
2B341.91.8e-131742521187
                     HHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
              B3  11 lksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                     ++   l +p  fa+++   ++  + +tl+++d ++ + W vkl+ + +++r+ l++GW+eFv +n+Lk gD+++ +ld++
  XP_026398686.1 174 FSIPYLNIPTVFANSNnlRESAGSIITLRVRDvKKVKGWPVKLQ-TFSGDRMCLREGWSEFVVSNQLKLGDVCLMELDQT 252
                     4446689*********76444446678999995555*******5.55556689***********************9864 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MATPRSHNPH FFKVLMQGFQ QNLVIPPAFA NEQKELMMSK HEKEIAFLRT RKINGDNLWK  60
VEVSRRRDDD EWCFDGDNWS EFVEHHDMKY GEFLVFEHTG DLIFNVFIYD YTFCEKGLPR  120
TRPRPHAHTR RSHKHGSRAV DDDLQSRSNR NKKPPMPTCL PCFTATMTAS NLVFSIPYLN  180
IPTVFANSNN LRESAGSIIT LRVRDVKKVK GWPVKLQTFS GDRMCLREGW SEFVVSNQLK  240
LGDVCLMELD QTARMEQERI ILNVRISRNA TSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31690.16e-26B3 family protein